Author details

Full Name

Vinsensius B Vega

Affiliation

ORCID

Career Start Year

2003

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
20181287	ChIA-PET tool for comprehensive chromatin interaction analysis with paired-end tag sequencing.		2010
19890323	An oestrogen-receptor-alpha-bound human chromatin interactome.	Nature	2009
19367334	Inherent signals in sequencing-based Chromatin-ImmunoPrecipitation control libraries.	PLoS One	2009
19136965	Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb.	Nature Cell Biology	2009
19300518	De-novo identification of PPARgamma/RXR binding sites and direct targets during adipogenesis.	PLoS One	2009
19348643	Inferring direct regulatory targets of a transcription factor in the DREAM2 challenge.	Ann N Y Acad Sci	2009
18682548	Evolution of the mammalian transcription factor binding repertoire via transposable elements.	Genome Res	2008
19022762	Transcriptional regulatory networks in embryonic stem cells.	Cold Spring Harbor Symposia on Quantitative Biology	2008
18618001	Zebrafish whole-adult-organism chemogenomics for large-scale predictive and discovery chemical biology.	PLoS Genet	2008
18555785	Integration of external signaling pathways with the core transcriptional network in embryonic stem cells.	Cell	2008
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
17428314	Inhibitory effects of estrogen receptor beta on specific hormone-responsive gene expression and association with disease outcome in primary breast cancer.	Breast Cancer Res	2007
17707233	Genome-wide mapping of RELA(p65) binding identifies E2F1 as a transcriptional activator recruited by NF-kappaB upon TLR4 activation.	Mol Cell	2007
17542648	Whole-genome cartography of estrogen receptor alpha binding sites.	PLoS Genet	2007
16518401	The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells.	Nat Genet	2006
16413492	A global map of p53 transcription-factor binding sites in the human genome.	Cell	2006
16961928	Multiplatform genome-wide identification and modeling of functional human estrogen receptor binding sites.	Genome Biol	2006
16849584	Gene expression preferentially regulated by tamoxifen in breast cancer cells and correlations with clinical outcome.	Cancer Res	2006
16888354	cis-regulatory region analysis using BEARR.	Methods in Molecular Biology	2006
16327811	Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression.	Nat Biotechnol	2006
16141321	An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival.	Proc Natl Acad Sci U S A	2005
15215391	BEARR: Batch Extraction and Analysis of cis-Regulatory Regions.	Nucleic Acids Res	2004
15591022	Genome-wide expression profiling; a panel of mouse tissues discloses novel biological functions of liver X receptors in adrenals.	J Mol Endocrinol	2004
15357874	A human in vitro model system for investigating genome-wide host responses to SARS coronavirus infection.	BMC Infect Dis	2004
15347429	Mutational dynamics of the SARS coronavirus in cell culture and human populations isolated in 2003.	BMC Infect Dis	2004
15345050	Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells.	Genome Biol	2004
15130927	Heterogeneity detector: finding heterogeneous positions in Phred/Phrap assemblies.	Bioinformatics	2004
15103000	Laboratory-acquired severe acute respiratory syndrome.	New England Journal of Medicine	2004
14993206	Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays.	Genome Res	2004
15057898	Identification of discriminators of hepatoma by gene expression profiling using a minimal dataset approach.	Hepatology	2004
12781537	Comparative full-length genome sequence analysis of 14 SARS coronavirus isolates and common mutations associated with putative origins of infection.	Lancet	2003
14563990	Comment on " 'Stemness': transcriptional profiling of embryonic and adult stem cells" and "a stem cell molecular signature".	Science	2003