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Author Details

Eran A Mukamel
University of California San Diego
2002
47
26
PMIDPaper TitleJournal TitlePublished Year
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
38092919Brain-wide correspondence of neuronal epigenomics and distant projections.Nature2023
37714849Divergent single cell transcriptome and epigenome alterations in ALS and FTD patients with C9orf72 mutation.Nat Commun2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37492103Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes.Cell Genom2023
37492103Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes.Cell Genom2023
37714849Divergent single cell transcriptome and epigenome alterations in ALS and FTD patients with C9orf72 mutation.Nat Commun2023
38092919Brain-wide correspondence of neuronal epigenomics and distant projections.Nature2023
34674833Multiple Comparisons and Inappropriate Statistical Testing Lead to Spurious Sex Differences in Gene Expression.Biol Psychiatry2022
35637184Cellular and genetic drivers of RNA editing variation in the human brain.Nat Commun2022
35419551Single nucleus multi-omics identifies human cortical cell regulatory genome diversity.Cell Genom2022
35604009<i>Dnmt3a</i> knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3.Elife2022
35319013Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse.Nature2022
34674833Multiple Comparisons and Inappropriate Statistical Testing Lead to Spurious Sex Differences in Gene Expression.Biol Psychiatry2022
35604009<i>Dnmt3a</i> knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3.Elife2022
35637184Cellular and genetic drivers of RNA editing variation in the human brain.Nat Commun2022
35419551Single nucleus multi-omics identifies human cortical cell regulatory genome diversity.Cell Genom2022
35319013Author Correction: Comparative cellular analysis of motor cortex in human, marmoset and mouse.Nature2022
34616065Epigenomic diversity of cortical projection neurons in the mouse brain.Nature2021
33637727Comprehensive analysis of single cell ATAC-seq data with SnapATAC.Nat Commun2021
34616068An atlas of gene regulatory elements in adult mouse cerebrum.Nature2021
34616066A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex.Nature2021
34616062Comparative cellular analysis of motor cortex in human, marmoset and mouse.Nature2021
34616065Epigenomic diversity of cortical projection neurons in the mouse brain.Nature2021
33637727Comprehensive analysis of single cell ATAC-seq data with SnapATAC.Nat Commun2021
34616068An atlas of gene regulatory elements in adult mouse cerebrum.Nature2021
34616066A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex.Nature2021
34616062Comparative cellular analysis of motor cortex in human, marmoset and mouse.Nature2021
33109720Evolution of regulatory signatures in primate cortical neurons at cell-type resolution.Proc Natl Acad Sci U S A2020
33109720Evolution of regulatory signatures in primate cortical neurons at cell-type resolution.Proc Natl Acad Sci U S A2020
30530112Perspectives on defining cell types in the brain.Curr Opin Neurobiol2019
30530112Perspectives on defining cell types in the brain.Curr Opin Neurobiol2019
30716470Maternal immune activation impairs cognitive flexibility and alters transcription in frontal cortex.Neurobiol Dis2019
30716470Maternal immune activation impairs cognitive flexibility and alters transcription in frontal cortex.Neurobiol Dis2019
29352183Environmental enrichment increases transcriptional and epigenetic differentiation between mouse dorsal and ventral dentate gyrus.Nat Commun2018
30263963A unique role for DNA (hydroxy)methylation in epigenetic regulation of human inhibitory neurons.Sci Adv2018
30095069A transient cortical state with sleep-like sensory responses precedes emergence from general anesthesia in humans.Elife2018
29352183Environmental enrichment increases transcriptional and epigenetic differentiation between mouse dorsal and ventral dentate gyrus.Nat Commun2018
30095069A transient cortical state with sleep-like sensory responses precedes emergence from general anesthesia in humans.Elife2018
30263963A unique role for DNA (hydroxy)methylation in epigenetic regulation of human inhibitory neurons.Sci Adv2018
28798132Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex.Science2017
28798132Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex.Science2017
28320934Allele-specific non-CG DNA methylation marks domains of active chromatin in female mouse brain.Proc Natl Acad Sci U S A2017
28320934Allele-specific non-CG DNA methylation marks domains of active chromatin in female mouse brain.Proc Natl Acad Sci U S A2017
26949250Epigenomic landscapes of retinal rods and cones.Elife2016
26949250Epigenomic landscapes of retinal rods and cones.Elife2016
26605523Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation.Nature2016
26605523Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation.Nature2016
26030523Human body epigenome maps reveal noncanonical DNA methylation variation.Nature2015
26087164Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain.Neuron2015
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Collaborators

Joseph R Ecker
The Salk Institute for Biological Studies
Co-authored papers 18
Joseph R Nery
The Salk Institute for Biological Studies
Co-authored papers 15
Bing Ren
Center for Epigenomics, University of California San Diego
Co-authored papers 10
Emery N Brown
Massachusetts Institute of Technology
Co-authored papers 8
Patrick L Purdon
Massachusetts General Hospital, Harvard Medical School
Co-authored papers 8
Rongxin Fang
Ludwig Institute for Cancer Research, University of California San Diego
Co-authored papers 7
Terrence J Sejnowski
Co-authored papers 7
Fangming Xie
University of California Los Angeles
Co-authored papers 7
Zizhen Yao
Allen Institute for Brain Science
Co-authored papers 6
Sebastian Preissl
Center for Epigenomics, University of California San Diego
Co-authored papers 6
Hongkui Zeng
Allen Institute for Brain Science
Co-authored papers 6
Mark A Urich
The Salk Institute for Biological Studies
Co-authored papers 5
Michael Hawrylycz
Allen Institute for Brain Science
Co-authored papers 4
Patrick R Hof
Icahn School of Medicine at Mount Sinai
Co-authored papers 4
Brian R Herb
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 4
Aviv Regev
Broad Institute of MIT and Harvard
Co-authored papers 4
Owen White
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 4
Jingtian Zhou
Co-authored papers 4
Ryan Lister
Co-authored papers 4
Ed S Lein
Allen Institute for Brain Science
Co-authored papers 4
Jesse Gillis
Stanley Institute for Cognitive Genomics
Co-authored papers 4
Seth A Ament
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 4
Joshua Orvis
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 4
Ronna Hertzano
University of Maryland School of Medicine
Co-authored papers 4
Stephan Fischer
Institut Pasteur, Universite Paris Cite
Co-authored papers 3
Emad N Eskandar
Massachusetts General Hospital
Co-authored papers 3
Evan Z Macosko
Co-authored papers 3
Sydney S Cash
Massachusetts General Hospital
Co-authored papers 3
Stella Dracheva
Co-authored papers 3
Richard H Scheuermann
J. Craig Venter Institute
Co-authored papers 3
Release 1.2