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Author Details

Jaewoo Kang
Korea University
2006
66
21
Ying Ding (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37261870Consistency enhancement of model prediction on document-level named entity recognition.Bioinformatics2023
37551911Biomedical relation extraction with knowledge base-refined weak supervision.Database (Oxford)2023
37387164ArkDTA: attention regularization guided by non-covalent interactions for explainable drug-target binding affinity prediction.Bioinformatics2023
36385263Differential effects of periodontal microbiome on the rheumatoid factor induction during rheumatoid arthritis pathogenesis.Sci Rep2022
35496236Neuropsychological Profile of College Students Who Engage in Binge Drinking.Front Psychol2022
36170114Full-text chemical identification with improved generalizability and tagging consistency.Database (Oxford)2022
33441585FlavorGraph: a large-scale food-chemical graph for generating food representations and recommending food pairings.Sci Rep2021
33744711Exploring the spatial reasoning ability of neural models in human IQ tests.Neural Netw2021
34520464Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge.PLoS Comput Biol2021
34083538Crowdsourced mapping of unexplored target space of kinase inhibitors.Nat Commun2021
31501885BioBERT: a pre-trained biomedical language representation model for biomedical text mining.Bioinformatics2020
31680157ChimerDB 4.0: an updated and expanded database of fusion genes.Nucleic Acids Res2020
32591513Building a PubMed knowledge graph.Sci Data2020
32218599Exacerbation of symptomatic arthritis by cigarette smoke in experimental arthritis.PLoS One2020
29650251Exploring the molecular mechanisms of Traditional Chinese Medicine components using gene expression signatures and connectivity map.Comput Methods Programs Biomed2019
31703457ARPNet: Antidepressant Response Prediction Network for Major Depressive Disorder.Genes (Basel)2019
32903361An automatic nuclei segmentation method based on deep convolutional neural networks for histopathology images.BMC Biomed Eng2019
31296219CONFIGURE: A pipeline for identifying context specific regulatory modules from gene expression data and its application to breast cancer.BMC Med Genomics2019
31209238Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.Nat Commun2019
31116384ReSimNet: drug response similarity prediction using Siamese neural networks.Bioinformatics2019
31138109CollaboNet: collaboration of deep neural networks for biomedical named entity recognition.BMC Bioinformatics2019
31023253paraFaceTest: an ensemble of regression tree-based facial features extraction for efficient facial paralysis classification.BMC Med Imaging2019
30617277Development of immunocompatible pluripotent stem cells via CRISPR-based human leukocyte antigen engineering.Exp Mol Med2019
29305341A Pilot Study of Biomedical Text Comprehension using an Attention-Based Deep Neural Reader: Design and Experimental Analysis.JMIR Med Inform2018
29975729Identification of novel susceptibility loci associated with hepatitis B surface antigen seroclearance in chronic hepatitis B.PLoS One2018
29997611Kruppel-Like Factor 4 Positively Regulates Autoimmune Arthritis in Mouse Models and Rheumatoid Arthritis in Patients <i>via</i> Modulating Cell Survival and Inflammation Factors of Fibroblast-Like Synoviocyte.Front Immunol2018
29961818Chemical-gene relation extraction using recursive neural network.Database (Oxford)2018
30226841Detection of masses in mammograms using a one-stage object detector based on a deep convolutional neural network.PLoS One2018
30594247Recapitulation of methotrexate hepatotoxicity with induced pluripotent stem cell-derived hepatocytes from patients with rheumatoid arthritis.Stem Cell Res Ther2018
30509191Classification of lung nodules in CT scans using three-dimensional deep convolutional neural networks with a checkpoint ensemble method.BMC Med Imaging2018
29697361Mut2Vec: distributed representation of cancerous mutations.BMC Med Genomics2018
29765977Systems Pharmacology-Based Approach of Connecting Disease Genes in Genome-Wide Association Studies with Traditional Chinese Medicine.Int J Genomics2018
29373599Drug drug interaction extraction from the literature using a recursive neural network.PLoS One2018
29560827BTNET : boosted tree based gene regulatory network inference algorithm using time-course measurement data.BMC Syst Biol2018
29560824In silico drug combination discovery for personalized cancer therapy.BMC Syst Biol2018
29368597Deep learning of mutation-gene-drug relations from the literature.BMC Bioinformatics2018
29758273In silico experiment system for testing hypothesis on gene functions using three condition specific biological networks.Methods2018
27899563ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining.Nucleic Acids Res2017
28362846Literature-based condition-specific miRNA-mRNA target prediction.PLoS One2017
26968938Efficient quantitative assessment of facial paralysis using iris segmentation and active contour-based key points detection with hybrid classifier.BMC Med Imaging2016
28155707Prioritizing biological pathways by recognizing context in time-series gene expression data.BMC Bioinformatics2016
27760149BEST: Next-Generation Biomedical Entity Search Tool for Knowledge Discovery from Biomedical Literature.PLoS One2016
27776539CLIP-GENE: a web service of the condition specific context-laid integrative analysis for gene prioritization in mouse TF knockout experiments.Biol Direct2016
27485446HiPub: translating PubMed and PMC texts to networks for knowledge discovery.Bioinformatics2016
27074804BRONCO: Biomedical entity Relation ONcology COrpus for extracting gene-variant-disease-drug relations.Database (Oxford)2016
25990557DSigDB: drug signatures database for gene set analysis.Bioinformatics2015
26681397An integrated bioinformatics analysis to dissect kinase dependency in triple negative breast cancer.BMC Genomics2015
26206305Identifying kinase dependency in cancer cells by integrating high-throughput drug screening and kinase inhibition data.Bioinformatics2015
26174789Erratum to: Feasibility of Using a Mobile Application for the Monitoring and Management of Stroke-Associated Risk Factors.J Clin Neurol2015
26147457iCOSSY: An Online Tool for Context-Specific Subnetwork Discovery from Gene Expression Data.PLoS One2015
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Collaborators

Aik Choon Tan
Huntsman Cancer Institute, The University of Utah
Co-authored papers 17
Minji Jeon
Korea University College of Medicine
Co-authored papers 15
Sunkyu Kim
Korea University
Co-authored papers 13
Minjae Yoo
University of Colorado Anschutz Medical Campus
Co-authored papers 7
Jimin Shin
Sungkyunkwan University School of Medicine
Co-authored papers 5
Donghyeon Park
Korea University
Co-authored papers 4
Donghyeon Kim
Korea Advanced Institute of Science and Technology
Co-authored papers 4
Justin Guinney
University of Washington
Co-authored papers 3
Jiong Yang
Co-authored papers 2
Avner Schlessinger
Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai
Co-authored papers 2
Kristen K Dang
Benaroya Research Institute at Virginia Mason
Co-authored papers 2
Gustavo Stolovitzky
IBM T.J. Watson Research Center
Co-authored papers 2
Minbyul Jeong
Korea University
Co-authored papers 2
Robert J Allaway
Geisel School of Medicine, Dartmouth College
Co-authored papers 2
Justin F Rousseau
University of Texas at Austin
Co-authored papers 1
Chana Hecht
Icahn School of Medicine at Mount Sinai
Co-authored papers 1
Dennis Wang
Sheffield Institute of Translational Neuroscience, University of Sheffield
Co-authored papers 1
Thea Norman
Bill & Melinda Gates Foundation
Co-authored papers 1
Anthony K H Tung
Co-authored papers 1
Mingyue Zheng
Shanghai Institute of Materia Medica, Chinese Academy of Sciences
Co-authored papers 1
Yuanfang Guan
University of Michigan ann arbor
Co-authored papers 1
Yi Bu
Peking University
Co-authored papers 1
Tirtha K Das
Icahn School of Medicine at Mount Sinai
Co-authored papers 1
Hwisang Jeon
Korea University
Co-authored papers 1
Islam Akef Ebeid
University of Texas at Austin
Co-authored papers 1
Stephen Fawell
Oncology R&D
Co-authored papers 1
Thomas Yu
Co-authored papers 1
Ying Ding (CM4AI)
University of Texas at Austin
Co-authored papers 1
Jeong-Hyeon Choi
National Marine Biodiversity Institute of Korea
Co-authored papers 1
Elias Chaibub Neto
University of Wisconsin-Madison.
Co-authored papers 1
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