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Author Details

Thanasis Margaritis
Princess Maxima Center for Pediatric Oncology
2006
27
18
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37823774Ewing Sarcoma Single-cell Transcriptome Analysis Reveals Functionally Impaired Antigen-presenting Cells.Cancer Res Commun2023
37883554Unbiased transcription factor CRISPR screen identifies ZNF800 as master repressor of enteroendocrine differentiation.Science2023
34304246Identification and characterization of relapse-initiating cells in MLL-rearranged infant ALL by single-cell transcriptomics.Leukemia2022
35476984Hypoxic, glycolytic metabolism is a vulnerability of B-acute lymphoblastic leukemia-initiating cells.Cell Rep2022
36459971Optimized human intestinal organoid model reveals interleukin-22-dependency of paneth cell formation.Cell Stem Cell2022
36002022Optimized human intestinal organoid model reveals interleukin-22-dependency of paneth cell formation.Cell Stem Cell2022
34162837Single cell derived mRNA signals across human kidney tumors.Nat Commun2021
33547074Tumor to normal single-cell mRNA comparisons reveal a pan-neuroblastoma cancer cell.Sci Adv2021
33848015LGR6 marks nephron progenitor cells.Dev Dyn2021
33500353Single-cell atlas of developing murine adrenal gland reveals relation of Schwann cell precursor signature to neuroblastoma phenotype.Proc Natl Acad Sci U S A2021
32161258An organoid biobank for childhood kidney cancers that captures disease and tissue heterogeneity.Nat Commun2020
30833775Tubuloids derived from human adult kidney and urine for personalized disease modeling.Nat Biotechnol2019
31226206CHETAH: a selective, hierarchical cell type identification method for single-cell RNA sequencing.Nucleic Acids Res2019
28049706Coordination of Cell Cycle Progression and Mitotic Spindle Assembly Involves Histone H3 Lysine 4 Methylation by Set1/COMPASS.Genetics2017
28637236The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation.Nucleic Acids Res2017
24952590Cell cycle population effects in perturbation studies.Mol Syst Biol2014
24766815Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors.Cell2014
22244335H2B ubiquitylation controls the formation of export-competent mRNP.Mol Cell2012
23028359Two distinct repressive mechanisms for histone 3 lysine 4 methylation through promoting 3'-end antisense transcription.PLoS Genet2012
22697265Yeast glucose pathways converge on the transcriptional regulation of trehalose biosynthesis.BMC Genomics2012
21596317The specificity and topology of chromatin interaction pathways in yeast.Mol Cell2011
21145464Functional overlap and regulatory links shape genetic interactions between signaling pathways.Cell2010
19401678Adaptable gene-specific dye bias correction for two-channel DNA microarrays.Mol Syst Biol2009
18485867Poised RNA polymerase II gives pause for thought.Cell2008
18819010Transcriptome analysis approaches for the isolation of trichome-specific genes from the medicinal plant Cistus creticus subsp. creticus.Plant Mol Biol2008
18722179Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.Mol Cell2008
17946341Improved microarray spot segmentation by combining two information channels.Conf Proc IEEE Eng Med Biol Soc2006
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Collaborators

Frank C P Holstege
Princess Maxima Center for Pediatric Oncology
Co-authored papers 23
Philip Lijnzaad
Princess Maxima Center for Pediatric Oncology
Co-authored papers 9
Hans Clevers
Princess Maxima Center for Pediatric Oncology
Co-authored papers 7
Patrick Kemmeren
Princess Maxima Center for Pediatric Oncology
Co-authored papers 7
Dik van Leenen
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University
Co-authored papers 7
Sander R van Hooff
Princess Maxima Center for Pediatric Oncology
Co-authored papers 6
Nathalie Brabers
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 5
Joris J Benschop
Center for Molecular Medicine, University Medical Center Utrecht
Co-authored papers 5
Mariel O Brok
Princess Maxima Center for Pediatric Oncology
Co-authored papers 4
Katrin Sameith
Center for Molecular and Cellular Bioengineering
Co-authored papers 4
Tineke L Lenstra
the Netherlands Cancer Institute, Oncode Institute
Co-authored papers 4
Loes A L van de Pasch
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 4
Marian J A Groot Koerkamp
Princess Maxima Center for Pediatric Oncology Research
Co-authored papers 4
Cheuk W Ko
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 3
Linda V Bakker
Wageningen University and Research
Co-authored papers 3
Marc van de Wetering
Princess Maxima Center for Pediatric Oncology
Co-authored papers 3
Eva Apweiler
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 3
Christoph Klein
Kinderklinik und Kinderpoliklinik der Ludwig-Maximilians-Universitat Munchen
Co-authored papers 2
Sarah A Teichmann
Wellcome Sanger Institute
Co-authored papers 2
Sake van Wageningen
Oncode Institute, The Netherlands Cancer Institute
Co-authored papers 2
Muzlifah Haniffa
Wellcome Sanger Institute
Co-authored papers 2
Omer Ali Bayraktar
Wellcome Sanger Institute
Co-authored papers 2
Karin Straathof
Co-authored papers 2
Antony J Miles
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 2
Neil J Sebire
NIHR Great Ormond Street Biomedical Research Centre
Co-authored papers 2
Berend Snel
Utrecht University
Co-authored papers 2
Catherine Dargemont
Institute of Human Genetics, UMR 9002 CNRS - University of Montpellier
Co-authored papers 2
Marcel Kool
Hopp Children's Cancer Center (KiTZ)
Co-authored papers 2
Roger A Barker
John Van Geest Center for Brain Repair, University of Cambridge
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Jan J Molenaar
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Release 1.2