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Author Details

Alex Zelter
University of Washington
2003
39
23
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36629399Improved Analysis of Cross-Linking Mass Spectrometry Data with Kojak 2.0, Advanced by Integration into the Trans-Proteomic Pipeline.J Proteome Res2023
37305927BRCA1/BARD1 intrinsically disordered regions facilitate chromatin recruitment and ubiquitylation.EMBO J2023
36651597DASH/Dam1 complex mutants stabilize ploidy in histone-humanized yeast by weakening kinetochore-microtubule attachments.EMBO J2023
35184559Discovery and Visualization of Uncharacterized Drug-Protein Adducts Using Mass Spectrometry.Anal Chem2022
35353161Three interacting regions of the Ndc80 and Dam1 complexes support microtubule tip-coupling under load.J Cell Biol2022
35716664Cullin-independent recognition of HHARI substrates by a dynamic RBR catalytic domain.Structure2022
33949948CM1-driven assembly and activation of yeast γ-tubulin small complex underlies microtubule nucleation.Elife2021
30525651Proxl (Protein Cross-Linking Database): A Public Server, QC Tools, and Other Major Updates.J Proteome Res2019
31584935Kinetochore-associated Stu2 promotes chromosome biorientation in vivo.PLoS Genet2019
31045356First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study.Anal Chem2019
29487209Human Ska complex and Ndc80 complex interact to form a load-bearing assembly that strengthens kinetochore-microtubule attachments.Proc Natl Acad Sci U S A2018
29903865Novel phosphorylation states of the yeast spindle pole body.Biol Open2018
30392931A Bifunctional Role for the UHRF1 UBL Domain in the Control of Hemi-methylated DNA-Dependent Histone Ubiquitylation.Mol Cell2018
29476041CYP26C1 Is a Hydroxylase of Multiple Active Retinoids and Interacts with Cellular Retinoic Acid Binding Proteins.Mol Pharmacol2018
29386393Identification of Wiskott-Aldrich syndrome protein (WASP) binding sites on the branched actin filament nucleator Arp2/3 complex.Proc Natl Acad Sci U S A2018
28191870The Ndc80 complex bridges two Dam1 complex rings.Elife2017
26968363Structure of γ-tubulin small complex based on a cryo-EM map, chemical cross-links, and a remotely related structure.J Struct Biol2016
27805565Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer.Elife2016
27302480ProXL (Protein Cross-Linking Database): A Platform for Analysis, Visualization, and Sharing of Protein Cross-Linking Mass Spectrometry Data.J Proteome Res2016
27416800Direct protein-protein interactions and substrate channeling between cellular retinoic acid binding proteins and CYP26B1.FEBS Lett2016
27226487Higher-order oligomerization of Spc110p drives γ-tubulin ring complex assembly.Mol Biol Cell2016
26937021Identification of Tazarotenic Acid as the First Xenobiotic Substrate of Human Retinoic Acid Hydroxylase CYP26A1 and CYP26B1.J Pharmacol Exp Ther2016
25599398Ring closure activates yeast γTuRC for species-specific microtubule nucleation.Nat Struct Mol Biol2015
26430240Regulation of outer kinetochore Ndc80 complex-based microtubule attachments by the central kinetochore Mis12/MIND complex.Proc Natl Acad Sci U S A2015
26560693The molecular architecture of the Dam1 kinetochore complex is defined by cross-linking based structural modelling.Nat Commun2015
25812159Kojak: efficient analysis of chemically cross-linked protein complexes.J Proteome Res2015
25230952Kinetochore biorientation in Saccharomyces cerevisiae requires a tightly folded conformation of the Ndc80 complex.Genetics2014
23833183Coupling unbiased mutagenesis to high-throughput DNA sequencing uncovers functional domains in the Ndc80 kinetochore protein of Saccharomyces cerevisiae.Genetics2013
22020119Comparison of the function and expression of CYP26A1 and CYP26B1, the two retinoic acid hydroxylases.Biochem Pharmacol2012
20631709Microtubule nucleating gamma-TuSC assembles structures with 13-fold microtubule-like symmetry.Nature2010
20513361The relative importance of CYP26A1 in hepatic clearance of all-trans retinoic acid.Biochem Pharmacol2010
20476776Isotope signatures allow identification of chemically cross-linked peptides by mass spectrometry: a novel method to determine interresidue distances in protein structures through cross-linking.J Proteome Res2010
18992717Expression and functional characterization of cytochrome P450 26A1, a retinoic acid hydroxylase.Biochem Pharmacol2009
19723581Localization and orientation of the gamma-tubulin small complex components using protein tags as labels for single particle EM.J Struct Biol2009
17978090The structure of the gamma-tubulin small complex: implications of its architecture and flexibility for microtubule nucleation.Mol Biol Cell2008
18364702Phosphoregulation and depolymerization-driven movement of the Dam1 complex do not require ring formation.Nat Cell Biol2008
15007097Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism.Microbiol Mol Biol Rev2004
15288019A comparative genomic analysis of the calcium signaling machinery in Neurospora crassa, Magnaporthe grisea, and Saccharomyces cerevisiae.Fungal Genet Biol2004
12712197The genome sequence of the filamentous fungus Neurospora crassa.Nature2003
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Collaborators

University of Washington
Co-authored papers 30
University of Washington
Co-authored papers 17
University of Washington
Co-authored papers 13
University of California, USA Quantitative Biosciences Institute (QBI) san francisco
Co-authored papers 8
University of Washington-Genome Sciences
Co-authored papers 8
Institute for Systems Biology
Co-authored papers 7
Institute for Systems Biology
Co-authored papers 6
University of Washington
Co-authored papers 5
University of Washington
Co-authored papers 5
University of Washington
Co-authored papers 4
University of California san francisco
Co-authored papers 3
University of Washington
Co-authored papers 3
University of Washington
Co-authored papers 3
University of California San Francisco
Co-authored papers 3
Macquarie University
Co-authored papers 2
University of California san francisco
Co-authored papers 2
University of California San Francisco
Co-authored papers 2
the University of Texas Southwestern Medical Center
Co-authored papers 2
University of Washington
Co-authored papers 2
Geisel School of Medicine at Dartmouth
Co-authored papers 2
McGill University
Co-authored papers 1
Network Center for Biomedical Research in Neurodegenerative Diseases (CIBERNED)
Co-authored papers 1
ETH Zurich
Co-authored papers 1
Center for Structural Mass Spectrometry, Martin Luther University Halle-Wittenberg
Co-authored papers 1
Institute of Microbiology of the CAS
Co-authored papers 1
University of Washington
Co-authored papers 1
Co-authored papers 1
Institute of Life Sciences, The Hebrew University
Co-authored papers 1
Institute for Biotechnology, Technical University Berlin
Co-authored papers 1
University of California Berkeley
Co-authored papers 1