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Author Details

Marcio Luis Acencio
Norwegian University of Science and Technology
2000
31
13
Dexter Pratt (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37992291TFCheckpoint database update, a cross-referencing system for transcription factors from human, mouse and rat.Nucleic Acids Res2024
37426048A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance.Front Bioinform2023
38022524The SYSCID map: a graphical and computational resource of molecular mechanisms across rheumatoid arthritis, systemic lupus erythematosus and inflammatory bowel disease.Front Immunol2023
35205397Latent Membrane Protein 1 (LMP1) from Epstein-Barr Virus (EBV) Strains M81 and B95.8 Modulate miRNA Expression When Expressed in Immortalized Human Nasopharyngeal Cells.Genes (Basel)2022
35606928Biomarkers of systemic treatment response in people with psoriasis: a scoping review.Br J Dermatol2022
35482474Biomarkers of disease progression in people with psoriasis: a scoping review.Br J Dermatol2022
32637990The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).Bioinformatics2021
34939300COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
34673265A GO catalogue of human DNA-binding transcription factors.Biochim Biophys Acta Gene Regul Mech2021
34664389COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
32707870miRTil: An Extensive Repository for Nile Tilapia microRNA Next Generation Sequencing Data.Cells2020
30793173CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination.Bioinformatics2019
31710663The Cytoscape BioGateway App: explorative network building from the BioGateway triple store.Bioinformatics2019
29844338Genome-wide microRNA screening in Nile tilapia reveals pervasive isomiRs' transcription, sex-biased arm switching and increasing complexity of expression throughout development.Sci Rep2018
28260122Impacts of the overexpression of a tomato translationally controlled tumor protein (TCTP) in tobacco revealed by phenotypic and transcriptomic analysis.Plant Cell Rep2017
27014079Predicting Essential Genes and Proteins Based on Machine Learning and Network Topological Features: A Comprehensive Review.Front Physiol2016
27980533Corrigendum: Predicting Essential Genes and Proteins Based on Machine Learning and Network Topological Features: A Comprehensive Review.Front Physiol2016
27557880An ensemble framework for identifying essential proteins.BMC Bioinformatics2016
26106890Transcriptome response signatures associated with the overexpression of a mitochondrial uncoupling protein (AtUCP1) in tobacco.PLoS One2015
26696900Prediction of Druggable Proteins Using Machine Learning and Systems Biology: A Mini-Review.Front Physiol2015
23437369Cooperative RNA polymerase molecules behavior on a stochastic sequence-dependent model for transcription elongation.PLoS One2013
24204854Prediction of oncogenic interactions and cancer-related signaling networks based on network topology.PLoS One2013
24267406Unravelling the Neospora caninum secretome through the secreted fraction (ESA) and quantification of the discharged tachyzoite using high-resolution mass spectrometry-based proteomics.Parasit Vectors2013
23894138GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks.Bioinformatics2013
23741499The development of a universal in silico predictor of protein-protein interactions.PLoS One2013
22900683HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions.BMC Genomics2012
21210975A machine learning approach for genome-wide prediction of morbid and druggable human genes based on systems-level data.BMC Genomics2010
19758426Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information.BMC Bioinformatics2009
14593198The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags.Proc Natl Acad Sci U S A2003
11070084Identification of human chromosome 22 transcribed sequences with ORF expressed sequence tags.Proc Natl Acad Sci U S A2000
10910347The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis.Nature2000
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Collaborators

Martin Kuiper
Norwegian University of Science and Technology
Co-authored papers 5
Reinhard Schneider
Co-authored papers 4
Astrid Laegreid
Norwegian University of Science and Technology
Co-authored papers 4
Henning Hermjakob
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Pablo Porras
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Luana Licata
University of Tor Vergata
Co-authored papers 4
Emmanuel Dias-Neto
A.C. Camargo Cancer Center
Co-authored papers 3
Ruth C Lovering
University College London, Institute for Cardiovascular Science
Co-authored papers 3
Wilson A Silva
Ribeirao Preto Medical School - University of Sao Paulo
Co-authored papers 3
Andrew J G Simpson
University of Hull
Co-authored papers 3
Marco A Zago
Center for Cell-Based Therapy (CTC)
Co-authored papers 3
Julio Saez-Rodriguez
Institute of Computational Biomedicine, Heidelberg University
Co-authored papers 3
D??nes T??rei
Heidelberg University
Co-authored papers 3
Dirce Maria Carraro
AC Camargo Cancer Center
Co-authored papers 3
Anamaria A Camargo
Hospital Sirio-Libanes
Co-authored papers 3
Karen Rothfels
Co-authored papers 2
Lisa Matthews
NYU Grossman School of Medicine
Co-authored papers 2
Emmanuel Barillot
Institut Curie, Universite PSL
Co-authored papers 2
Sandra Orchard
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Vasundra Tour??
Norwegian University of Science and Technology (NTNU)
Co-authored papers 2
Cristoffer Sevilla
Co-authored papers 2
José Eduardo Krieger
Co-authored papers 2
Augustin Luna
Harvard Medical School
Co-authored papers 2
Ozgun Babur
Houston Methodist Research Institute
Co-authored papers 2
Marc Gillespie
Ontario Institute for Cancer Research
Co-authored papers 2
Aurelien Dugourd
Institute of Experimental Medicine and Systems Biology, RWTH Aachen University
Co-authored papers 2
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 2
Livia Perfetto
Department of Biology and Biotechnologies "Charles Darwin", La Sapienza University
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Release 1.2