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Author Details

Rui Fa
University College London
2013
10
6
PMIDPaper TitleJournal TitlePublished Year
31335894Using deep maxout neural networks to improve the accuracy of function prediction from protein interaction networks.PLoS One2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
29889900Predicting human protein function with multi-task deep neural networks.PLoS One2018
27769165Distinct gene expression program dynamics during erythropoiesis from human induced pluripotent stem cells compared with adult and cord blood progenitors.BMC Genomics2016
26040489UNCLES: method for the identification of genes differentially consistently co-expressed in a specific subset of datasets.BMC Bioinformatics2015
24714159SMART: unique splitting-while-merging framework for gene clustering.PLoS One2014
26356344Noise Resistant Generalized Parametric Validity Index of Clustering for Gene Expression Data.IEEE/ACM Trans Comput Biol Bioinform2014
25267386Comprehensive analysis of forty yeast microarray datasets reveals a novel subset of genes (APha-RiB) consistently negatively associated with ribosome biogenesis.BMC Bioinformatics2014
23349438Yeast gene CMR1/YDL156W is consistently co-expressed with genes participating in DNA-metabolic processes in a variety of stringent clustering experiments.J R Soc Interface2013
23409186Paradigm of tunable clustering using Binarization of Consensus Partition Matrices (Bi-CoPaM) for gene discovery.PLoS One2013
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Collaborators

Domenico Cozzetto
Imperial College London
Co-authored papers 3
Cen Wan
University College London
Co-authored papers 3
David T Jones
University College London
Co-authored papers 3
Naihui Zhou
The First Affiliated Hospital of Soochow University
Co-authored papers 1
Peter L Freddolino
University of Michigan ann arbor
Co-authored papers 1
Prajwal Bhat
Royal Holloway University of London
Co-authored papers 1
Itamar Borukhov
Institute of Biotechnology, University of Helsinki
Co-authored papers 1
Maria J Martin
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 1
Md Nafiz Hamid
Iowa State University
Co-authored papers 1
Larry Davis
Co-authored papers 1
Radoslav Davidovic
Institute of Nuclear Sciences Vinca, University of Belgrade
Co-authored papers 1
Mohammad R K Mofrad
University of California Berkeley
Co-authored papers 1
Sa??o D??eroski
Jozef Stefan Institute
Co-authored papers 1
Marco Mesiti
Universita degli Studi di Milano
Co-authored papers 1
Neven Sumonja
Institute of Nuclear Sciences VINCA, University of Belgrade
Co-authored papers 1
Magdalena Kotlicka-Antczak
Medical University of Lodz
Co-authored papers 1
Alan J Medlar
Co-authored papers 1
Rui Fa
University College London
Co-authored papers 1
Sabeur Aridhi
Universite de Lorraine, CNRS
Co-authored papers 1
Qizhong Mao
Temple University
Co-authored papers 1
Fabio Fabris
University of Kent
Co-authored papers 1
Wei-Cheng Tseng
Taipei Veterans General Hospital
Co-authored papers 1
Christophe Dessimoz
University of Lausanne
Co-authored papers 1
Gage S Black
Brigham Young University
Co-authored papers 1
Suyang Dai
Fudan University
Co-authored papers 1
Maxat Kulmanov
King Abdullah University of Science and Technology.
Co-authored papers 1
Kai Hakala
University of Turku
Co-authored papers 1
Tomislav ??muc
Ruder Boskovic Institute
Co-authored papers 1
Giuseppe Profiti
University of Bologna
Co-authored papers 1
Olivier Lichtarge
Baylor College of Medicine
Co-authored papers 1
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