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Author Details

Ronald Jansen
Memorial Sloan-Kettering Cancer Center
1999
23
21
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
17540677Total ancestry measure: quantifying the similarity in tree-like classification, with genomic applications.Bioinformatics2007
16446785Signal processing in the TGF-beta superfamily ligand-receptor network.PLoS Comput Biol2006
15451510Analyzing protein function on a genomic scale: the importance of gold-standard positives and negatives for network prediction.Curr Opin Microbiol2004
23573642Bridging structural biology and genomics: assessing protein interaction data with known complexes.Drug Discov Today2004
15189167Analyzing cellular biochemistry in terms of molecular networks.Annu Rev Biochem2004
15491499Information assessment on predicting protein-protein interactions.BMC Bioinformatics2004
12682375Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of models.Nucleic Acids Res2003
14696388Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences.Methods Enzymol2003
14564010A Bayesian networks approach for predicting protein-protein interactions from genomic data.Science2003
11779829Relating whole-genome expression data with protein-protein interactions.Genome Res2002
12836664Integration of genomic datasets to predict protein complexes in yeast.J Struct Funct Genomics2002
12350343Bridging structural biology and genomics: assessing protein interaction data with known complexes.Trends Genet2002
12421757Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons.Genome Res2002
12016056Analysis of mRNA expression and protein abundance data: an approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts.Bioinformatics2002
11914276Subcellular localization of the yeast proteome.Genes Dev2002
11786630Proteomics. Integrating interactomes.Science2002
11474067Global analysis of protein activities using proteome chips.Science2001
11292848PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information.Nucleic Acids Res2001
11544189Interrelating different types of genomic data, from proteome to secretome: 'oming in on function.Genome Res2001
10684945Analysis of the yeast transcriptome with structural and functional categories: characterizing highly expressed proteins.Nucleic Acids Res2000
11050323Genome-wide analysis relating expression level with protein subcellular localization.Trends Genet2000
11042457The current excitement in bioinformatics-analysis of whole-genome expression data: how does it relate to protein structure and function?Curr Opin Struct Biol2000
10586881Large-scale analysis of the yeast genome by transposon tagging and gene disruption.Nature1999
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Collaborators

Mark Gerstein
Yale University
Co-authored papers 22
Dov Greenbaum
Reichman University (IDC) Herzliya
Co-authored papers 7
Haiyuan Yu
Weill Institute for Cell and Molecular Biology, Cornell University
Co-authored papers 4
Michael Snyder
Stanford University
Co-authored papers 4
Perry L Miller
Clinical Epidemiology Research Center (CERC), VA Connecticut Healthcare System
Co-authored papers 3
Jiang Qian
Co-authored papers 3
Jack F Greenblatt
College Street, University of Toronto
Co-authored papers 3
Gustavo Stolovitzky
IBM T.J. Watson Research Center
Co-authored papers 2
Hongyu Zhao
Yale University
Co-authored papers 2
Kei-Hoi Cheung
Yale University School of Medicine
Co-authored papers 2
Aled M Edwards
University of Toronto
Co-authored papers 2
Bart Kus
Hospital for Sick Children, University of Toronto
Co-authored papers 2
Harmen J Bussemaker
Co-authored papers 1
Yuval Kluger
Yale University School of Medicine
Co-authored papers 1
Paul Bertone
Co-authored papers 1
Yu Xia
College of Information Engineering, Zhejiang University of Technology
Co-authored papers 1
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 1
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 1
Karl Hager
Yale School of Medicine
Co-authored papers 1
Andrew Emili
Boston University School of Medicine, Boston University
Co-authored papers 1
Michael Seringhaus
Co-authored papers 1
Sambath Chung
University of North Carolina School of Medicine
Co-authored papers 1
Sarah A Teichmann
Wellcome Sanger Institute
Co-authored papers 1
Joaqu??n Dopazo
Andalusian Public Foundation Progress and Health-FPS
Co-authored papers 1
Release 1.2