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Author Details

Stephen M Mount
University of Maryland, College Park
1980
68
36
PMIDPaper TitleJournal TitlePublished Year
36451524Analyses of Marsilea vestita genome and transcriptomes do not support widespread intron retention during spermatogenesis.New Phytol2023
37316351Single-cell methylation sequencing data reveal succinct metastatic migration histories and tumor progression models.Genome Res2023
37440715Comparison of red raspberry and wild strawberry fruits reveals mechanisms of fruit type specification.Plant Physiol2023
34905278Comparative transcriptomic analysis of apple and peach fruits: insights into fruit type specification.Plant J2022
36497367Sex Biases in Cancer and Autoimmune Disease Incidence Are Strongly Positively Correlated with Mitochondrial Gene Expression across Human Tissues.Cancers (Basel)2022
33782402Expanding the scope of plant genome engineering with Cas12a orthologs and highly multiplexable editing systems.Nat Commun2021
33868343An Atlas of Genomic Resources for Studying Rosaceae Fruits and Ornamentals.Front Plant Sci2021
33898973Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences.Plant Commun2020
31409274Yanagi: Fast and interpretable segment-based alternative splicing and gene expression analysis.BMC Bioinformatics2019
31301154Assessing predictions of the impact of variants on splicing in CAGI5.Hum Mutat2019
29991484Consensus Coexpression Network Analysis Identifies Key Regulators of Flower and Fruit Development in Wild Strawberry.Plant Physiol2018
29997126The Splicing Factor <i>RNA-Binding Fox Protein 1</i> Mediates the Cellular Immune Response in <i>Drosophila melanogaster</i>.J Immunol2018
29020934Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana.BMC Genomics2017
27356612A Genealogical Look at Shared Ancestry on the X Chromosome.Genetics2016
26110739Insights from GWAS: emerging landscape of mechanisms underlying complex trait disease.BMC Genomics2015
26463979Recognizing the 35th anniversary of the proposal that snRNPs are involved in splicing.Mol Biol Cell2015
26315999Erratum to: Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm.BMC Bioinformatics2015
26160651Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm.BMC Bioinformatics2015
24752080Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms.Nat Biotechnol2014
20163699Evolutionary dynamics of U12-type spliceosomal introns.BMC Evol Biol2010
19403727Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development.Plant Physiol2009
18432245The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).Nature2008
17095541Spliceosomal small nuclear RNA genes in 11 insect genomes.RNA2007
17994087Evolution of genes and genomes on the Drosophila phylogeny.Nature2007
17958908Features generated for computational splice-site prediction correspond to functional elements.BMC Bioinformatics2007
17576680SplicePort--an interactive splice-site analysis tool.Nucleic Acids Res2007
17517127A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana.BMC Bioinformatics2007
17194304Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis.BMC Genomics2006
15256412Reducing storage requirements for biological sequence comparison.Bioinformatics2004
15611175The Drosophila U1-70K protein is required for viability, but its arginine-rich domain is dispensable.Genetics2004
12490553Sex-lethal splicing autoregulation in vivo: interactions between SEX-LETHAL, the U1 snRNP and U2AF underlie male exon skipping.Development2003
14500829Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies.Nucleic Acids Res2003
12481130The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.Science2002
12226482Evidence for a plastid origin of plant ethylene receptor genes.Plant Physiol2002
10729829Expanding the definition of informational suppression.Trends Genet2000
10908584Pre-messenger RNA processing factors in the Drosophila genome.J Cell Biol2000
10986039Genomic sequence, splicing, and gene annotation.Am J Hum Genet2000
10731132The genome sequence of Drosophila melanogaster.Science2000
9080768Genetic depletion reveals an essential role for an SR protein splicing factor in vertebrate cells.Bioessays1997
8596928AT-AC introns: an ATtACk on dogma.Science1996
8939586Ribosomal RNA: small nucleolar RNAs make their mark.Curr Biol1996
7473725Localization of sequences required for size-specific splicing of a small Drosophila intron in vitro.J Mol Biol1995
7565780Genetic enhancement of RNA-processing defects by a dominant mutation in B52, the Drosophila gene for an SR protein splicing factor.Mol Cell Biol1995
7828820Suppressor U1 snRNAs in Drosophila.Genetics1994
8005410P element-mediated in vivo deletion analysis of white-apricot: deletions between direct repeats are strongly favored.Genetics1994
8423778Species-specific signals for the splicing of a short Drosophila intron in vitro.Mol Cell Biol1993
15335735Gene organization: nested genes take flight.Curr Biol1993
8507505[Localization of E(wa) in Drosophila melanogaster using rearrangement].Yi Chuan Xue Bao1993
1508718Splicing signals in Drosophila: intron size, information content, and consensus sequences.Nucleic Acids Res1992
1849643Polyadenylylation in copia requires unusually distant upstream sequences.Proc Natl Acad Sci U S A1991
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Collaborators

Chiao-Feng Lin
Co-authored papers 4
Steven L Salzberg
Center for Computational Biology, Johns Hopkins University
Co-authored papers 4
Arthur L Delcher
Center for Computational Biology, Johns Hopkins School of Medicine
Co-authored papers 4
Brian J Haas
Broad Institute of MIT and Harvard
Co-authored papers 3
Gerald M Rubin
The University of Florida
Co-authored papers 3
Valer Gotea
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 3
Rezarta Islamaj DoĿan
Co-authored papers 2
Alejandro A Sch??ffer
National Cancer Institute, National Institutes of Health
Co-authored papers 2
Granger G Sutton
J. Craig Venter Institute
Co-authored papers 2
Yu-Hui Rogers
Johns Hopkins Bayview Research Campus
Co-authored papers 2
Roger A Hoskins
University of California berkeley
Co-authored papers 2
James A Yorke
University of Maryland, College Park
Co-authored papers 2
Eugene W Myers
Max Planck Institute of Molecular Cell Biology and Genetics
Co-authored papers 2
H??ctor Corrada Bravo
University of Maryland College Park, College Park
Co-authored papers 2
J C Venter
The J. Craig Venter Institute
Co-authored papers 2
Owen White
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 2
Eytan Ruppin
National Cancer Institute
Co-authored papers 2
William M Gelbart
University of California Los Angeles
Co-authored papers 2
Gary H Karpen
University of California Berkeley
Co-authored papers 2
Michael C Schatz
Johns Hopkins University
Co-authored papers 2
Jeremy D Selengut
Craig Venter Institute, 9704 Medical Center Drive
Co-authored papers 2
Jennifer R Wortman
Broad Institute of MIT and Harvard
Co-authored papers 2
Kenneth Aldape
National Cancer Institute
Co-authored papers 2
W John Wilbur
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 2
Susan E Celniker
Lawrence Berkeley National Laboratory
Co-authored papers 2
David R Nelson
University of Tennessee Health Science Center
Co-authored papers 2
Karin A Remington
The J. Craig Venter Institute.
Co-authored papers 2
Eli Venter
Vanderbilt University, Columbia University Medical Center
Co-authored papers 2
Kim D Pruitt
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 1
Manolis Kellis
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Release 1.2