Skip to Main Content

Author Details

Ulrich Omasits
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
2008
35
23
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
35938294Accelerating SLC Transporter Research: Streamlining Knowledge and Validated Tools.Clin Pharmacol Ther2022
33972798Cell-surface SLC nucleoside transporters and purine levels modulate BRD4-dependent chromatin states.Nat Metab2021
32265506The RESOLUTE consortium: unlocking SLC transporters for drug discovery.Nat Rev Drug Discov2020
33262325Epistasis-driven identification of SLC25A51 as a regulator of human mitochondrial NAD import.Nat Commun2020
32697042A substrate-based ontology for human solute carriers.Mol Syst Biol2020
31320712The transporters SLC35A1 and SLC30A1 play opposite roles in cell survival upon VSV virus infection.Sci Rep2019
29632367Proteotype profiling unmasks a viral signalling network essential for poxvirus assembly and transcriptional competence.Nat Microbiol2018
29940521Efficacy of extended clinical management, group CBT, and group plus individual CBT for major depression: Results of a two-year follow-up study.J Affect Disord2018
30373828The in silico human surfaceome.Proc Natl Acad Sci U S A2018
29779931The Bicarbonate Transporter SLC4A7 Plays a Key Role in Macrophage Phagosome Acidification.Cell Host Microbe2018
29141959An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics.Genome Res2017
27075392Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms.Nat Commun2016
26627837A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli.J Biol Chem2016
26746581Quantitative proteomic analysis of Shigella flexneri and Shigella sonnei Generalized Modules for Membrane Antigens (GMMA) reveals highly pure preparations.Int J Med Microbiol2016
27107716Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.BMC Genomics2016
25841012Ï¿54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111.Appl Environ Microbiol2015
26076441Surfaceome of classical Hodgkin and non-Hodgkin lymphoma.Proteomics Clin Appl2015
25894527A mass spectrometric-derived cell surface protein atlas.PLoS One2015
24162465Protter: interactive protein feature visualization and integration with experimental proteomic data.Bioinformatics2014
24878426Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data.J Proteomics2014
24463964A link between arabinose utilization and oxalotrophy in Bradyrhizobium japonicum.Appl Environ Microbiol2014
24486812Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism.J Proteomics2014
24392666Combine and conquer: surfactants, solvents, and chaotropes for robust mass spectrometry based analyses of membrane proteins.Anal Chem2014
24023794Response of Burkholderia cenocepacia H111 to micro-oxia.PLoS One2013
23878158Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome.Genome Res2013
23902262Proteomics analysis of Psychotria leaf nodule symbiosis: improved genome annotation and metabolic predictions.Mol Plant Microbe Interact2013
23840627The hemolymph proteome of fed and starved Drosophila larvae.PLoS One2013
22909291Proteomic analysis reveals drug accessible cell surface N-glycoproteins of primary and established glioblastoma cell lines.J Proteome Res2012
23185499The AHL- and BDSF-dependent quorum sensing systems control specific and overlapping sets of genes in Burkholderia cenocepacia H111.PLoS One2012
20657836A comparative approach linking molecular dynamics of altered peptide ligands and MHC with in vivo immune responses.PLoS One2010
20928849vmdICE: a plug-in for rapid evaluation of molecular dynamics simulations using VMD.J Comput Chem2010
19194661A critical cross-validation of high throughput structural binding prediction methods for pMHC.J Comput Aided Mol Des2009
19852516jSimMacs for GROMACS: a Java application for advanced molecular dynamics simulations with remote access capability.J Chem Inf Model2009
192324393-Layer-based analysis of peptide-MHC interaction: in silico prediction, peptide binding affinity and T cell activation in a relevant allergen-specific model.Mol Immunol2009
18434501Side chain substitution benchmark for peptide/MHC interaction.Protein Sci2008
  • 1 - 35 of 35

Recommended Authors

Jacob M Wozniak
The Scripps Research Institute
Career Start Year 2017
Number of shared co-authors 0
Chen Li
Biomedicine Discovery Institute, Monash University
Career Start Year 2015
Number of shared co-authors 2
Felipe da Veiga Leprevost
University of Michigan ann arbor
Career Start Year 2013
Number of shared co-authors 0
Peter Cimermancic
Verily Life Sciences LLC
Career Start Year 2011
Number of shared co-authors 1
David Jimenez-Morales
J. David Gladstone Institutes
Career Start Year 2008
Number of shared co-authors 0
Robert J A Goode
Monash Biomedicine Discovery Institute, Monash University
Career Start Year 2008
Number of shared co-authors 1
David J Gonzalez
Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California
Career Start Year 2008
Number of shared co-authors 0
Mark N Wass
University of Kent
Career Start Year 2007
Number of shared co-authors 0
Samuel H Payne
Brigham Young University
Career Start Year 2006
Number of shared co-authors 1
Charles Ansong
Pacific Northwest National Laboratory
Career Start Year 2004
Number of shared co-authors 0
Vera van Noort
Leiden University, Institute of Biology Leiden
Career Start Year 2003
Number of shared co-authors 2
Andrey Tovchigrechko
J. Craig Venter Institute, 9605 Medical Center Dr
Career Start Year 2001
Number of shared co-authors 0
Yufeng Zhai
ShanghaiTech University
Career Start Year 2000
Number of shared co-authors 0
Oliver Kohlbacher
Max Planck Institute for Developmental Biology
Career Start Year 2000
Number of shared co-authors 2
Kevin Bryson
University of Glasgow
Career Start Year 1999
Number of shared co-authors 0
Daron M Standley
Osaka university
Career Start Year 1998
Number of shared co-authors 0
Erik Verschueren
University of California San Francisco
Career Start Year 1997
Number of shared co-authors 2
Krzysztof Paw??owski
Kashubian Center for Heart and Vascular Diseases in Wejherowo, Pomeranian Hospitals
Career Start Year 1996
Number of shared co-authors 0
Alex Bateman
European Bioinformatics Institute (EMBL-EBI)
Career Start Year 1995
Number of shared co-authors 0
Maria J Martin
European Bioinformatics Institute (EMBL-EBI)
Career Start Year 1994
Number of shared co-authors 1
Ioannis Xenarios
University of Lausanne
Career Start Year 1994
Number of shared co-authors 3
Jason E McDermott
Pacific Northwest National Laboratory
Career Start Year 1993
Number of shared co-authors 0
Marc R Wilkins
University of New South Wales
Career Start Year 1992
Number of shared co-authors 5
Gyorgy Babnigg
Argonne National Laboratory
Career Start Year 1992
Number of shared co-authors 0
Peer Bork
University of Wurzburg
Career Start Year 1989
Number of shared co-authors 3
David Feny??
Institute for Systems Genetics, NYU Grossman School of Medicine
Career Start Year 1989
Number of shared co-authors 2
Adam Godzik
University of California Riverside
Career Start Year 1987
Number of shared co-authors 0
Michal Linial
Institute of Life Sciences, The Hebrew University of Jerusalem
Career Start Year 1986
Number of shared co-authors 2
Shoba Ranganathan
Macquarie University
Career Start Year 1972
Number of shared co-authors 2
Andras Fiser
Albert Einstein College of Medicine
Career Start Year 1968
Number of shared co-authors 1

Collaborators

Bernd Wollscheid
ETH Zurich
Co-authored papers 10
Damaris Bausch-Fluck
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 4
Andreas Hofmann
Heidelberg University
Co-authored papers 3
Sandra Goetze
ETH Zurich
Co-authored papers 3
Thomas Bock
University of Basel
Co-authored papers 3
Ruedi Aebersold
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 3
Rebekah L Gundry
Medical College of Wisconsin
Co-authored papers 2
Andreas P Frei
Roche Pharma Research & Early Development (pRED)
Co-authored papers 2
Mark D Robinson
University of Zurich
Co-authored papers 2
Hansjoerg Moest
Institute of Food, ETH Zurich
Co-authored papers 2
Andrea Jacobs
University of Zurich
Co-authored papers 2
Gerardo Cárcamo-Oyarce
Co-authored papers 2
Mathias Uhl??n
KTH Royal Institute of Technology
Co-authored papers 1
Holger Moch
University Hospital Zurich
Co-authored papers 1
Douglas B Kell
Novo Nordisk Foundation Centre for Biosustainability, Technical University of Denmark
Co-authored papers 1
Silvia Dolski
University Hospital Zurich
Co-authored papers 1
Niklaus Krayenbuehl
Clinical Neuroscience Center, University Hospital and University of Zurich
Co-authored papers 1
Stefan Kubicek
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 1
Neil Swainston
Institute of Systems, University of Liverpool
Co-authored papers 1
Matthew Waas
Present address: Princess Margaret Cancer Centre, University Health Network
Co-authored papers 1
Aled M Edwards
University of Toronto
Co-authored papers 1
Peter W Zandstra
Co-authored papers 1
Julia A Vorholt
Co-authored papers 1
Maxim Imakaev
Co-authored papers 1
Karl Frei
University Hospital Zurich
Co-authored papers 1
Alexander Schmidt
Co-authored papers 1
Jennifer E Van Eyk
Smidt Heart Institute, Cedars-Sinai Medical Center
Co-authored papers 1
Emma Lundberg (CM4AI)
Stanford University
Co-authored papers 1
Release 1.2