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Author Details

Carl J Schmidt
1981
128
41
PMIDPaper TitleJournal TitlePublished Year
37127810Chicken pituitary transcriptomic responses to acute heat stress.2023
37699936Single nucleus transcriptomics of ventral midbrain identifies glial activation associated with chronic opioid use disorder.2023
37549140Proteomic insight into human directed selection of the domesticated chicken Gallus gallus.PLoS One2023
36833329CD99 and the Chicken Alloantigen D Blood System.2023
36945611Single Nucleus Transcriptomics Reveals Pervasive Glial Activation in Opioid Overdose Cases.2023
37130071A high-quality de novo genome assembly for clapper rail (Rallus crepitans).2023
35977798The Chicken A and E Blood Systems Arise from Genetic Variation in and around the Regulators of Complement Activation Region.Journal of Immunology2022
34030631Transcriptomic and metabolomic characterization of post-hatch metabolic reprogramming during hepatic development in the chicken.BMC Genomics2021
34182374Opioid deaths involving concurrent benzodiazepine use: Assessing risk factors through the analysis of prescription drug monitoring data and postmortem toxicology.2021
33833197Utility of CDC Screening Guidelines and Autopsy Findings in Identifying Decedents Who Die of SARS-CoV-2 Infection.American Journal of Forensic Medicine and Pathology2021
32497207Recommendations for Advancing Genome to Phenome Research in Non-Model Organisms.Integrative and Comparative Biology2020
31657871Evaluating Bioinformatic Pipeline Performance for Forensic Microbiome Analysis.2020
32461821fRNAkenseq: a fully powered-by-CyVerse cloud integrated RNA-sequencing analysis tool.PeerJ2020
33013786Dysbiosis in the Dead: Human Postmortem Microbiome Beta-Dispersion as an Indicator of Manner and Cause of Death.Frontiers in Microbiology2020
32721621Associations detected between measures of neighborhood environmental conditions and human microbiome diversity.Science of the Total Environment2020
31545812Variant analysis pipeline for accurate detection of genomic variants from transcriptome sequencing data.PLoS ONE2019
31573614Effects of acute and chronic heat stress on the performance, egg quality, body temperature, and blood gas parameters of laying hens.Poultry Science2019
30281528Nonrheumatoid Fibrinous Pericarditis: A Medical Examiner Algorithm for the Diagnosis of Viral Myocarditis and Use of Molecular Diagnostic Techniques.American Journal of Forensic Medicine and Pathology2019
31238874Genetic analysis of production, physiological, and egg quality traits in heat-challenged commercial white egg-laying hens using 600k SNP array data.Genetics Selection Evolution2019
30986212Machine learning performance in a microbial molecular autopsy context: A cross-sectional postmortem human population study.PLoS ONE2019
31541148Genetic lines respond uniquely within the chicken thymic transcriptome to acute heat stress and low dose lipopolysaccharide.Scientific Reports2019
31139205Natural Selection Footprints Among African Chicken Breeds and Village Ecotypes.Frontiers in Genetics2019
30870464Detection of critical antibiotic resistance genes through routine microbiome surveillance.PLoS ONE2019
31170333Total RNA Analysis of Bacterial Community Structural and Functional Shifts Throughout Vertebrate Decomposition.2019
30733491Differentially expressed gene networks, biomarkers, long noncoding RNAs, and shared responses with cocaine identified in the midbrains of human opioid abusers.Sci Rep2019
31208322Understanding the liver under heat stress with statistical learning: an integrated metabolomics and transcriptomics computational approach.BMC Genomics2019
31002114Venous blood gas and chemistry components are moderately heritable in commercial white egg-laying hens under acute or chronic heat exposure.Poultry Science2019
31057499Bacterial Community Succession, Transmigration, and Differential Gene Transcription in a Controlled Vertebrate Decomposition Model.Frontiers in Microbiology2019
30693019Detection of Selection Signatures Among Brazilian, Sri Lankan, and Egyptian Chicken Populations Under Different Environmental Conditions.Frontiers in Genetics2018
30405330Opioid Deaths: Trends, Biomarkers, and Potential Drug Interactions Revealed by Decision Tree Analyses.Front Neurosci2018
30311252FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community.Anim Genet2018
30165812Immunomodulatory effects of heat stress and lipopolysaccharide on the bursal transcriptome in two distinct chicken lines.BMC Genomics2018
30517173Distinct genes and pathways associated with transcriptome differences in early cardiac development between fast- and slow-growing broilers.PLoS ONE2018
30517117Gene expression profiling of the early pathogenesis of wooden breast disease in commercial broiler chickens using RNA-sequencing.PLoS ONE2018
30365526Identifying mechanisms of regulation to model carbon flux during heat stress and generate testable hypotheses.PLoS ONE2018
29636512A large-scale survey of the postmortem human microbiome, and its potential to provide insight into the living health condition.Scientific Reports2018
29688361TransAtlasDB: an integrated database connecting expression data, metadata and variants.Database : the journal of biological databases and curation2018
29771706Accidental Carbon Monoxide Poisoning While Driving: A Case Report With Review of the Literature.American Journal of Forensic Medicine and Pathology2018
28120409Frozen: Thawing and Its Effect on the Postmortem Microbiome in Two Pediatric Cases.2017
28341699Genomic Comparison of Indigenous African and Northern European Chickens Reveals Putative Mechanisms of Stress Tolerance Related to Environmental Selection Pressure.G3 (Bethesda)2017
28759571Chicken hepatic response to chronic heat stress using integrated transcriptome and metabolome analysis.PLoS ONE2017
28407751Transcriptome analysis reveals potential mechanisms underlying differential heart development in fast- and slow-growing broilers under heat stress.BMC Genomics2017
28609139Evidence and role of phlebitis and lipid infiltration in the onset and pathogenesis of Wooden Breast Disease in modern broiler chickens.Avian Pathology2017
28472919WebGIVI: a web-based gene enrichment analysis and visualization tool.BMC Bioinformatics2017
29152805Commentary on: Schuman MJ, Hutchins KD. Severe retinal hemorrhages with retinoschisis in infants are not pathognomonic for abusive head trauma. J Forensic Sci 2017;62(3):807-11.2017
27856505Transcriptomic changes throughout post-hatch development in Gallus gallus pituitary.Journal of Molecular Endocrinology2017
28166270Unique genetic responses revealed in RNA-seq of the spleen of chickens stimulated with lipopolysaccharide and short-term heat.PLoS ONE2017
28137821Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling.Genome Res2017
27716918Commode Cardia-Death by Valsalva Maneuver: A Case Series.2016
27238770Distinct functional responses to stressors of bone marrow derived dendritic cells from diverse inbred chicken lines.Developmental and Comparative Immunology2016
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