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Author Details

Hongzhu Qu
University of Chinese Academy of Sciences
2007
36
11
Nathan Sheffield (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37791883CROST: a comprehensive repository of spatial transcriptomics.Nucleic Acids Res2024
36739525DNA methylation-based age prediction with bloodstains using pyrosequencing and random forest regression.Electrophoresis2023
37609816Overview of multi-omics research in gout.Yi Chuan2023
36685970DeteX: A highly accurate software for detecting SNV and InDel in single and paired NGS data in cancer research.Front Genet2023
34624550Common Postzygotic Mutational Signatures in Healthy Adult Tissues Related to Embryonic Hypoxia.Genomics Proteomics Bioinformatics2022
36465348Single-cell transcriptomic analysis of the tumor ecosystem of adenoid cystic carcinoma.Front Oncol2022
36046337Single-cell RNA sequencing reveals the cellular and molecular changes that contribute to the progression of lung adenocarcinoma.Front Cell Dev Biol2022
35045866A deep learning model for early risk prediction of heart failure with preserved ejection fraction by DNA methylation profiles combined with clinical features.Clin Epigenetics2022
35264217A machine learning-assisted model for renal urate underexcretion with genetic and clinical variables among Chinese men with gout.Arthritis Res Ther2022
34702705Omics big data and medical artificial intelligence.Yi Chuan2021
34644394Regulatory association of long noncoding RNAs and chromatin accessibility facilitates erythroid differentiation.Blood Adv2021
30895303Platform-independent approach for cancer detection from gene expression profiles of peripheral blood cells.Brief Bioinform2020
31552089The Trends in Global Gene Expression in Mouse Embryonic Stem Cells During Spaceflight.Front Genet2019
35402806Long noncoding RNA <i>PCED1B-AS1</i> promotes erythroid differentiation coordinating with GATA1 and chromatin remodeling.Blood Sci2019
31811943GliomaDB: A Web Server for Integrating Glioma Omics Data and Interactive Analysis.Genomics Proteomics Bioinformatics2019
31809865Big Data and the Brain: Peeking at the Future.Genomics Proteomics Bioinformatics2019
30369474[Applications of machine learning in clinical decision support in the omic era].Yi Chuan2018
27734462MicroRNA 200a inhibits erythroid differentiation by targeting PDCD4 and THRB.Br J Haematol2017
27965103Biological Databases for Hematology Research.Genomics Proteomics Bioinformatics2016
25707591Databases and web tools for cancer genomics study.Genomics Proteomics Bioinformatics2015
26311227Molecular biomarkers screened by next-generation RNA sequencing for non-sentinel lymph node status prediction in breast cancer patients with metastatic sentinel lymph nodes.World J Surg Oncol2015
26635134A novel strategy for forensic age prediction by DNA methylation and support vector regression model.Sci Rep2015
26703568MiR-218 Inhibits Erythroid Differentiation and Alters Iron Metabolism by Targeting ALAS2 in K562 Cells.Int J Mol Sci2015
25843800Knockdown of transcription factor forkhead box O3 (FOXO3) suppresses erythroid differentiation in human cells and zebrafish.Biochem Biophys Res Commun2015
24846964[The ENCODE project and functional genomics studies].Yi Chuan2014
23722115A brief review on the Human Encyclopedia of DNA Elements (ENCODE) project.Genomics Proteomics Bioinformatics2013
24121002Transcriptome dynamics during human erythroid differentiation and development.Genomics2013
23993951Transcriptional environment and chromatin architecture interplay dictates globin expression patterns of heterospecific hybrids derived from undifferentiated human embryonic stem cells or from their erythroid progeny.Exp Hematol2013
23985037Comprehensive characterization of erythroid-specific enhancers in the genomic regions of human Krüppel-like factors.BMC Genomics2013
23084774Strand-biased gene distribution in bacteria is related to both horizontal gene transfer and strand-biased nucleotide composition.Genomics Proteomics Bioinformatics2012
22955980Widespread plasticity in CTCF occupancy linked to DNA methylation.Genome Res2012
22955828Systematic localization of common disease-associated variation in regulatory DNA.Science2012
22955617The accessible chromatin landscape of the human genome.Nature2012
20868744Nucleotide compositional asymmetry between the leading and lagging strands of eubacterial genomes.Res Microbiol2010
19011765HRGD: a database for mining potential heterosis-related genes in plants.Plant Mol Biol2009
17877838Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data.BMC Plant Biol2007
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Collaborators

John A Stamatoyannopoulos
Altius Institute for Biomedical Sciences
Co-authored papers 5
Jun Yu
Beijing Institute of Genomics, Chinese Academy of Sciences
Co-authored papers 4
Hao Wang
Altius Institute for Biomedical Sciences
Co-authored papers 4
Richard Sandstrom
Altius Institute for Biomedical Sciences
Co-authored papers 4
Theresa K Canfield
University of Washington
Co-authored papers 3
Peter J Sabo
University of Washington
Co-authored papers 3
Rajinder Kaul
Altius Institute for Biomedical Sciences
Co-authored papers 3
Kristen Lee
Altius Institute for Biomedical Sciences
Co-authored papers 3
Robert E Thurman
University of Washington
Co-authored papers 3
Matthew T Maurano
Institute for Systems Genetics, NYU School of Medicine
Co-authored papers 3
Eric Rynes
Altius Institute for Biomedical Sciences
Co-authored papers 2
Eric Haugen
Altius Institute for Biomedical Sciences
Co-authored papers 2
Anthony Shafer
University of Washington
Co-authored papers 2
R S Hansen
University of Washington
Co-authored papers 2
Alex P Reynolds
Altius Institute for Biomedical Sciences
Co-authored papers 2
Shane Neph
Altius Institute for Biomedical Sciences
Co-authored papers 2
Tanya Kutyavin
Altius Institute for Biomedical Sciences
Co-authored papers 2
Fidencio Neri
Altius Institute for Biomedical Sciences
Co-authored papers 2
Morgan Diegel
Altius Institute for Biomedical Sciences
Co-authored papers 2
Erika Giste
University of Washington
Co-authored papers 2
George Stamatoyannopoulos
University of Washington
Co-authored papers 2
Molly Weaver
University of Kentucky
Co-authored papers 2
Richard Humbert
University of Washington
Co-authored papers 2
Shamil R Sunyaev
Harvard Medical School
Co-authored papers 2
Audra K Johnson
Altius Institute for Biomedical Sciences
Co-authored papers 2
Daniel Bates
Altius Institute for Biomedical Sciences
Co-authored papers 2
Bum-Kyu Lee
Cancer Research Center, University at Albany, State University of New York
Co-authored papers 1
Alexias Safi
Center for Genomic and Computational Biology, Duke University Medical Center
Co-authored papers 1
Job Dekker
University of Massachusetts Chan Medical School
Co-authored papers 1
Lingyun Song
Center for Genomic & Computational Biology, Duke University
Co-authored papers 1
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