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Author Details

Sarah J Wheelan
National Human Genome Research Institute, National Institutes of Health
1998
88
36
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36373171Single-cell atlas of epithelial and stromal cell heterogeneity by lobe and strain in the mouse prostate.Prostate2023
36373171Single-cell atlas of epithelial and stromal cell heterogeneity by lobe and strain in the mouse prostate.Prostate2023
37808834Somatic mutations reveal hyperactive Notch signaling and racial disparities in prurigo nodularis.medRxiv2023
37985666Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases.Sci Data2023
37131822CRISPR-Cas9 for selective targeting of somatic mutations in pancreatic cancers.bioRxiv2023
37180140Corrigendum: Convergent antibody responses are associated with broad neutralization of hepatitis C virus.Front Immunol2023
37808834Somatic mutations reveal hyperactive Notch signaling and racial disparities in prurigo nodularis.medRxiv2023
37985666Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases.Sci Data2023
37180140Corrigendum: Convergent antibody responses are associated with broad neutralization of hepatitis C virus.Front Immunol2023
37131822CRISPR-Cas9 for selective targeting of somatic mutations in pancreatic cancers.bioRxiv2023
35201318Entinostat Decreases Immune Suppression to Promote Antitumor Responses in a HER2+ Breast Tumor Microenvironment.Cancer Immunol Res2022
35452513Identifying Phased Mutations and Complex Rearrangements in Human Prostate Cancer Cell Lines through Linked-Read Whole-Genome Sequencing.Mol Cancer Res2022
35201318Entinostat Decreases Immune Suppression to Promote Antitumor Responses in a HER2+ Breast Tumor Microenvironment.Cancer Immunol Res2022
35452513Identifying Phased Mutations and Complex Rearrangements in Human Prostate Cancer Cell Lines through Linked-Read Whole-Genome Sequencing.Mol Cancer Res2022
34290408Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers.Nature2021
34290408Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers.Nature2021
33713372Cell wall protein variation, break-induced replication, and subtelomere dynamics in Candida glabrata.Mol Microbiol2021
34672777Decreased Activated CD4<sup>+</sup> T Cell Repertoire Diversity After Antiretroviral Therapy in HIV-1/HCV Coinfection Correlates with CD4<sup>+</sup> T Cell Recovery.Viral Immunol2021
34608287Author Correction: Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers.Nature2021
34748900Comparative genomics of tadpole shrimps (Crustacea, Branchiopoda, Notostraca): Dynamic genome evolution against the backdrop of morphological stasis.Genomics2021
33713372Cell wall protein variation, break-induced replication, and subtelomere dynamics in Candida glabrata.Mol Microbiol2021
34672777Decreased Activated CD4<sup>+</sup> T Cell Repertoire Diversity After Antiretroviral Therapy in HIV-1/HCV Coinfection Correlates with CD4<sup>+</sup> T Cell Recovery.Viral Immunol2021
34608287Author Correction: Transcriptional programs of neoantigen-specific TIL in anti-PD-1-treated lung cancers.Nature2021
34748900Comparative genomics of tadpole shrimps (Crustacea, Branchiopoda, Notostraca): Dynamic genome evolution against the backdrop of morphological stasis.Genomics2021
32468444Pervasive promoter hypermethylation of silenced TERT alleles in human cancers.Cell Oncol (Dordr)2020
32068314De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays.Mol Microbiol2020
32015231A conserved intratumoral regulatory T cell signature identifies 4-1BB as a pan-cancer target.J Clin Invest2020
31830557Somatic mitochondrial mutation discovery using ultra-deep sequencing of the mitochondrial genome reveals spatial tumor heterogeneity in head and neck squamous cell carcinoma.Cancer Lett2020
32468444Pervasive promoter hypermethylation of silenced TERT alleles in human cancers.Cell Oncol (Dordr)2020
32589550A medical student scholarly concentrations program: scholarly self-efficacy and impact on future research activities.Med Educ Online2020
33230236Correction: Multi-ancestry fine mapping of interferon lambda and the outcome of acute hepatitis C virus infection.Genes Immun2020
33116245Multi-ancestry fine mapping of interferon lambda and the outcome of acute hepatitis C virus infection.Genes Immun2020
32015231A conserved intratumoral regulatory T cell signature identifies 4-1BB as a pan-cancer target.J Clin Invest2020
31830557Somatic mitochondrial mutation discovery using ultra-deep sequencing of the mitochondrial genome reveals spatial tumor heterogeneity in head and neck squamous cell carcinoma.Cancer Lett2020
32068314De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays.Mol Microbiol2020
33116245Multi-ancestry fine mapping of interferon lambda and the outcome of acute hepatitis C virus infection.Genes Immun2020
33230236Correction: Multi-ancestry fine mapping of interferon lambda and the outcome of acute hepatitis C virus infection.Genes Immun2020
32589550A medical student scholarly concentrations program: scholarly self-efficacy and impact on future research activities.Med Educ Online2020
31149346Mitochondrial genome diversity and evolution in Branchiopoda (Crustacea).Zoological Lett2019
30052772The Terabase Search Engine: a large-scale relational database of short-read sequences.Bioinformatics2019
31524636Equity and diversity in academic medicine: a perspective from the JCI editors.J Clin Invest2019
31149346Mitochondrial genome diversity and evolution in Branchiopoda (Crustacea).Zoological Lett2019
30052772The Terabase Search Engine: a large-scale relational database of short-read sequences.Bioinformatics2019
31524636Equity and diversity in academic medicine: a perspective from the JCI editors.J Clin Invest2019
28888037MYC drives overexpression of telomerase RNA (hTR/TERC) in prostate cancer.J Pathol2018
28888037MYC drives overexpression of telomerase RNA (hTR/TERC) in prostate cancer.J Pathol2018
30118659Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma.Transl Res2018
30532146Transcriptional profiling identifies novel regulators of macrophage polarization.PLoS One2018
30564290Properties of LINE-1 proteins and repeat element expression in the context of amyotrophic lateral sclerosis.Mob DNA2018
30083606CMPK2 and BCL-G are associated with type 1 interferon-induced HIV restriction in humans.Sci Adv2018
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Collaborators

Srinivasan Yegnasubramanian
Johns Hopkins University School of Medicine
Co-authored papers 16
Jef D Boeke
Institute for Systems Genetics, NYU School of Medicine
Co-authored papers 12
Daria A Gaykalova
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 6
Elana J Fertig
Johns Hopkins University School of Medicine
Co-authored papers 6
Michael J Considine
Johns Hopkins University School of Medicine
Co-authored papers 5
Alexander V Favorov
Johns Hopkins School of Medicine
Co-authored papers 5
Ben Ho Park
Vanderbilt University Medical Center
Co-authored papers 4
Joseph A Califano
University of California
Co-authored papers 4
Aparna Pallavajjala
Johns Hopkins University School of Medicine
Co-authored papers 4
Christopher D Gocke
Johns Hopkins University School of Medicine
Co-authored papers 4
Theresa Guo
Moores Cancer Center, University of California
Co-authored papers 4
Curt I Civin
Center for Stem Cell Biology & Regenerative Medicine and.
Co-authored papers 3
Bert Vogelstein
Co-authored papers 3
Pedram Argani
The Johns Hopkins Hospital
Co-authored papers 3
Kornel E Schuebel
National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health
Co-authored papers 3
Elizabeth M Jaffee
Convergence Institute, Johns Hopkins University
Co-authored papers 3
Wayne M Koch
Johns Hopkins University School of Medicine
Co-authored papers 3
William H Westra
Icahn School of Medicine at Mount Sinai Hospital.
Co-authored papers 3
Zubair Khan
University of Texas at Houston Health Science Center
Co-authored papers 3
Justin A Bishop
UT Southwestern Medical Center
Co-authored papers 3
Rafael A Irizarry
Dana-Farber Cancer Institute
Co-authored papers 3
Margaret A Taub
Co-authored papers 3
Ludmila Danilova
Bloomberg-Kimmel Immunotherapy Institute, Johns Hopkins University School of Medicine
Co-authored papers 3
Kenneth W Kinzler
Co-authored papers 3
Francisco Martinez Murillo
Co-authored papers 3
Victor E Velculescu
Co-authored papers 2
Deanna M Church
Present address: Inscripta Inc.
Co-authored papers 2
Michael P Busch
Vitalant Research Institute
Co-authored papers 2
Raymond T Chung
Massachusetts General Hospital and Harvard Medical School
Co-authored papers 2
Mark S Boguski
Precision Medicine Network Inc.
Co-authored papers 2
Release 1.2