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Author Details

Fabio Zanini
Stanford University
2006
37
19
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36879800Developmental diversity and unique sensitivity to injury of lung endothelial subtypes during postnatal growth.iScience2023
37938000Hepatitis C virus infects and perturbs liver stem cells.mBio2023
35902769Mesoderm-derived PDGFRA<sup>+</sup> cells regulate the emergence of hematopoietic stem cells in the dorsal aorta.Nat Cell Biol2022
35639509Disentangling single-cell omics representation with a power spectral density-based feature extraction.Nucleic Acids Res2022
35561197Analysing high-throughput sequencing data in Python with HTSeq 2.0.Bioinformatics2022
33788849The transcriptional landscape of Venezuelan equine encephalitis virus (TC-83) infection.PLoS Negl Trop Dis2021
32484158Diverse homeostatic and immunomodulatory roles of immune cells in the developing mouse lung at single cell resolution.Elife2020
32943655Northstar enables automatic classification of known and novel cell types from tumor samples.Sci Rep2020
32699843An Agonistic Anti-CD137 Antibody Disrupts Lymphoid Follicle Structure and T-Cell-Dependent Antibody Responses.Cell Rep Med2020
32555563[Coagulopathy in COVID-19: pathophysiology].G Ital Cardiol (Rome)2020
31820734Broadly neutralizing human antibodies against dengue virus identified by single B cell transcriptomics.Elife2019
29451494Single-cell transcriptional dynamics of flavivirus infection.Elife2018
30085954Influenza Vaccination Can Broadly Activate the HIV Reservoir During Antiretroviral Therapy.J Acquir Immune Defic Syndr2018
30530648Virus-inclusive single-cell RNA sequencing reveals the molecular signature of progression to severe dengue.Proc Natl Acad Sci U S A2018
29753658Feasibility and biological rationale of repurposing sunitinib and erlotinib for dengue treatment.Antiviral Res2018
28039047Error rates, PCR recombination, and sampling depth in HIV-1 whole genome deep sequencing.Virus Res2017
28458914<i>In vivo</i> mutation rates and the landscape of fitness costs of HIV-1.Virus Evol2017
27855060Establishment and stability of the latent HIV-1 DNA reservoir.Elife2016
25587698Hierarchical molecular dynamics of bovine serum albumin in concentrated aqueous solution below and above thermal denaturation.Phys Chem Chem Phys2015
26652000Population genomics of intrapatient HIV-1 evolution.Elife2015
26266736Salt-Induced Universal Slowing Down of the Short-Time Self-Diffusion of a Globular Protein in Aqueous Solution.J Phys Chem Lett2015
25754899Exogenous reinfection of tuberculosis in a low-burden area.Infection2015
24694826Mycobacterium tuberculosis Beijing family: analysis of the epidemiological and clinical factors associated with an emerging lineage in the urban area of Milan.Infect Genet Evol2014
25448889Thalidomide mimics uridine binding to an aromatic cage in cereblon.J Struct Biol2014
25443297RuvB-like ATPases function in chromatin decondensation at the end of mitosis.Dev Cell2014
24835564Protein cluster formation in aqueous solution in the presence of multivalent metal ions--a light scattering study.Soft Matter2014
24902560A new predictive model for an improved respiratory isolation strategy in HIV-infected patients with PTB.Int J Tuberc Lung Dis2014
23986591Quantifying selection against synonymous mutations in HIV-1 env evolution.J Virol2013
24363886Influence of Hospitalization upon Diagnosis on the Risk of Tuberculosis Clustering.Mediterr J Hematol Infect Dis2013
23097421FFPopSim: an efficient forward simulation package for the evolution of large populations.Bioinformatics2012
21460330Tubercular gluteus abscesses: a return to the early 20th century or a consequence of new, unprecedented behaviors?Clin Infect Dis2011
21719734Mycobacterial interspersed repetitive-unit-variable-number tandem-repeat analysis and Beijing/W family of Mycobacterium tuberculosis.J Clin Microbiol2011
19832707Genotyping analyses of tuberculosis transmission among immigrant residents in Italy.Clin Microbiol Infect2010
20520721CD4+ T cell depletion, immune activation and increased production of regulatory T cells in the thymus of HIV-infected individuals.PLoS One2010
17999096The usefulness of PCR assay in diagnosing disseminated mycobacterial infection in AIDS patients.Eur J Clin Microbiol Infect Dis2008
16619165Molecular epidemiology of tuberculosis.Clin Infect Dis2006
16864720FoxP3 mRNA expression in regulatory T cells from patients with tuberculosis.Am J Respir Crit Care Med2006
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Collaborators

Stephen R Quake
Stanford University
Co-authored papers 8
Shirit Einav
Stanford University School of Medicine
Co-authored papers 5
Thong T Nguyen
Gladstone Institute of Virology
Co-authored papers 1
Maxim N Artyomov
Co-authored papers 1
Adrianus C M Boon
Co-authored papers 1
Gloria S Pryhuber
University of Rochester
Co-authored papers 1
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 1
Todd C McDevitt
Gladstone Institute of Cardiovascular Disease
Co-authored papers 1
Grigori Enikolopov
Co-authored papers 1
Taha Y Taha
Gladstone Institutes
Co-authored papers 1
Tal Ashuach
Co-authored papers 1
Nir Yosef
Center for Computational Biology, University of California berkeley
Co-authored papers 1
Stewart Cooper
California Pacific Medical Center Research Institute
Co-authored papers 1
Danielle E Lyons
Gladstone Institute of Virology
Co-authored papers 1
Davey M Smith
University of California San Diego
Co-authored papers 1
Ann L Erickson
California Pacific Medical Center Research Institute
Co-authored papers 1
Jody L Baron
University of California San Francisco
Co-authored papers 1
Simon Anders
Heidelberg University
Co-authored papers 1
Nathan L Meyers
Gladstone Institute of Virology
Co-authored papers 1
Camille R Simoneau
Gladstone Institute of Virology
Co-authored papers 1
Norma Neff
Stanford University
Co-authored papers 1
Berthold Göttgens
Co-authored papers 1
Tokameh Mahmoudi
Erasmus University Medical Center
Co-authored papers 1
Claude M Nagamine
Stanford University School of Medicine
Co-authored papers 1
Simón Méndez-Ferrer
Co-authored papers 1
Mehdi Bouhaddou
J. David Gladstone Institutes
Co-authored papers 1
G Renuka Kumar
Gladstone Institute of Virology
Co-authored papers 1
Melanie Ott
Gladstone Institute of Virology
Co-authored papers 1
Mir M Khalid
Gladstone Institutes
Co-authored papers 1
Vaishaali Natarajan
Gladstone Institute of Cardiovascular Disease
Co-authored papers 1
Release 1.2