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Author Details

Ignacio Medina
2002
50
23
PMIDPaper TitleJournal TitlePublished Year
30922213PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.BMC Bioinformatics2019
28931371VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy.BMC Bioinformatics2017
28535294HGVA: the Human Genome Variation Archive.Nucleic Acids Res2017
27257970Gene Co-Expression Network Analysis for Identifying Modules and Functionally Enriched Pathways in Type 1 Diabetes.PLoS ONE2016
27296979Web-based network analysis and visualization using CellMaps.Bioinformatics2016
26921234HPG pore: an efficient and scalable framework for nanopore sequencing data.BMC Bioinformatics2016
26740642Highly sensitive and ultrafast read mapping for RNA-seq analysis.DNA Res2016
27137885Actionable pathways: interactive discovery of therapeutic targets using signaling pathway models.Nucleic Acids Res2016
26690675Identification of epistatic interactions through genome-wide association studies in sporadic medullary and juvenile papillary thyroid carcinomas.BMC Med Genomics2015
25883139Assessing the impact of mutations found in next generation sequencing data over human signaling pathways.Nucleic Acids Res2015
25626517Fast inexact mapping using advanced tree exploration on backward search methods.BMC Bioinformatics2015
25897133Babelomics 5.0: functional interpretation for new generations of genomic data.Nucleic Acids Res2015
26111507The European Genome-phenome Archive of human data consented for biomedical research.Nat Genet2015
26069264A parallel and sensitive software tool for methylation analysis on multicore platforms.Bioinformatics2015
26451814Concurrent and Accurate Short Read Mapping on Multicore Processors.IEEE/ACM Trans Comput Biol Bioinform2015
25143289Acceleration of short and long DNA read mapping without loss of accuracy using suffix array.Bioinformatics2014
24861626A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications.Nucleic Acids Res2014
24803668A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies.Nucleic Acids Res2014
23748955Genome Maps, a new generation genome browser.Nucleic Acids Res2013
23748960Inferring the functional effect of gene expression changes in signaling pathways.Nucleic Acids Res2013
23365360Evaluation of immunoglobulin G absorption from colostrum supplements gavaged to newborn piglets.Journal of Animal Science2012
22595875Whole-genome bisulfite DNA sequencing of a DNMT3B mutant patient.Epigenetics2012
22844098Discovering the hidden sub-network component in a ranked list of genes or proteins derived from genomic experiments.Nucleic Acids Res2012
22693220CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources.Nucleic Acids Res2012
22693211VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing.Nucleic Acids Res2012
22693210Inferring the regulatory network behind a gene expression experiment.Nucleic Acids Res2012
22579363Determination of diffusion coefficients for supercritical fluids.Journal of Chromatography A2012
22906193A map of human microRNA variation uncovers unexpectedly high levels of variability.Genome Med2012
22450827Using GPUs for the exact alignment of short-read genetic sequences by means of the Burrows-Wheeler transform.IEEE/ACM Trans Comput Biol Bioinform2012
23155765Select your SNPs (SYSNPs): a web tool for automatic and massive selection of SNPs.Int J Data Min Bioinform2012
23270508Four new loci associations discovered by pathway-based and network analyses of the genome-wide variability profile of Hirschsprung's disease.Orphanet J Rare Dis2012
21646336Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.Nucleic Acids Res2011
21853134Sequencing of DISC1 pathway genes reveals increased burden of rare missense variants in schizophrenia patients from a northern Swedish population.PLoS ONE2011
20361057Initial genomics of the human nucleolus.PLoS Genet2010
20676074The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.Nat Biotechnol2010
20525784Serial Expression Analysis: a web tool for the analysis of serial gene expression data.Nucleic Acids Res2010
20478823Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling.Nucleic Acids Res2010
19502494Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies.Nucleic Acids Res2009
18443594SNP and haplotype mapping for genetic analysis in the rat.Nat Genet2008
19094230Biological processes, properties and molecular wiring diagrams of candidate low-penetrance breast cancer susceptibility genes.BMC Med Genomics2008
18515841Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments.Nucleic Acids Res2008
18508806GEPAS, a web-based tool for microarray data analysis and interpretation.Nucleic Acids Res2008
18086700Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.Nucleic Acids Res2008
17478504FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments.Nucleic Acids Res2007
17850810Using supercritical fluid chromatography to determine diffusion coefficients of 1,2-diethylbenzene, 1,4-diethylbenzene, 5-tert-butyl-m-xylene and phenylacetylene in supercritical carbon dioxide.Journal of Chromatography A2007
17468499ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.Nucleic Acids Res2007
17452346Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics.Nucleic Acids Res2007
17138587Prophet, a web-based tool for class prediction using microarray data.Bioinformatics2007
11786961gamma-Glutamyl transpeptidase overexpression increases metastatic growth of B16 melanoma cells in the mouse liver.Hepatology2002
12126761Inhibition of cancer growth by resveratrol is related to its low bioavailability.Free Radical Biology and Medicine2002
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