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Author Details

Reinhard Schneider
1991
125
44
PMIDPaper TitleJournal TitlePublished Year
37502697Visualization of automatically combined disease maps and pathway diagrams for rare diseases.Front Bioinform2023
38022524The SYSCID map: a graphical and computational resource of molecular mechanisms across rheumatoid arthritis, systemic lupus erythematosus and inflammatory bowel disease.Front Immunol2023
36648161Exploration and comparison of molecular mechanisms across diseases using MINERVA Net.2023
37325771Applications of Boolean modeling to study the dynamics of a complex disease and therapeutics responses.2023
37260509Arena3D<sup>web</sup>: interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration.NAR Genom Bioinform2023
36933065Analysis: Flawed Datasets of Monkeypox Skin Images.2023
37426048A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance.Front Bioinform2023
34791064COBREXA.jl: constraint-based reconstruction and exascale analysis.2022
35651522Smart Scheduling (SMASCH): multi-appointment scheduling system for longitudinal clinical research studies.JAMIA Open2022
35782730Boolean modelling as a logic-based dynamic approach in systems medicine.Computational and Structural Biotechnology Journal2022
34939300COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
32083642Closing the gap between formats for storing layout information in systems biology.Briefings in Bioinformatics2021
34276764Long Non-coding RNAs: Mechanisms, Experimental, and Computational Approaches in Identification, Characterization, and Their Biomarker Potential in Cancer.Frontiers in Genetics2021
33999203PredictProtein - Predicting Protein Structure and Function for 29 Years.Nucleic Acids Res2021
33839767Cardiovascular RNA markers and artificial intelligence may improve COVID-19 outcome: a position paper from the EU-CardioRNA COST Action CA17129.Cardiovascular Research2021
33885790Arena3Dweb: interactive 3D visualization of multilayered networks.Nucleic Acids Research2021
33834185Reusability and composability in process description maps: RAS-RAF-MEK-ERK signalling.Brief Bioinform2021
33309742AsthmaMap: An interactive knowledge repository for mechanisms of asthma.J Allergy Clin Immunol2021
34632381OnTheFly<sup>2.0</sup>: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis.NAR Genom Bioinform2021
34664389COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
31273380Closing the gap between formats for storing layout information in systems biology.Briefings in Bioinformatics2020
32371892COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.Sci Data2020
32193487Prediction of the Vaccine-derived Poliovirus Outbreak Incidence: A Hybrid Machine Learning Approach.Scientific Reports2020
33205814GigaSOM.jl: High-performance clustering and visualization of huge cytometry datasets.GigaScience2020
32632118Author Correction: Prediction of the Vaccine-derived Poliovirus Outbreak Incidence: A Hybrid Machine Learning Approach.Scientific Reports2020
32678106Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.Sci Data2020
32838742LAITOR4HPC: A text mining pipeline based on HPC for building interaction networks.BMC Bioinformatics2020
30935364Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium.BMC Bioinformatics2019
31800037DAISY: A Data Information System for accountability under the General Data Protection Regulation.Gigascience2019
30256906Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART.2019
30371894The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease.Nucleic Acids Res2019
29688273Community-driven roadmap for integrated disease maps.Brief Bioinform2019
31074494MINERVA API and plugins: opening molecular network analysis and visualization to the community.2019
29398565Personalized risk prediction of postoperative cognitive impairment - rationale for the EU-funded BioCog project.Eur Psychiatry2018
29931246MolArt: a molecular structure annotation and visualization tool.2018
30165440Fractalis: a scalable open-source service for platform-independent interactive visual analysis of biomedical data.GigaScience2018
30157777Clustering approaches for visual knowledge exploration in molecular interaction networks.BMC Bioinformatics2018
29872544Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms.NPJ Syst Biol Appl2018
30134843Identification of early biological changes in palmitate-treated isolated human islets.BMC Genomics2018
30183308Palmitate-Induced Insulin Hypersecretion and Later Secretory Decline Associated with Changes in Protein Expression Patterns in Human Pancreatic Islets.Journal of Proteome Research2018
27993782ReconMap: an interactive visualization of human metabolism.2017
28448538Combined lipidomic and proteomic analysis of isolated human islets exposed to palmitate reveals time-dependent changes in insulin secretion and lipid metabolism.PLoS ONE2017
28334291SmartR: an open-source platform for interactive visual analytics for translational research data.2017
27941426Pancreatic Fat Is Associated With Metabolic Syndrome and Visceral Fat but Not Beta-Cell Function or Body Mass Index in Pediatric Obesity.Pancreas2017
27821178Erratum to: Making sense of big data in health research: towards an EU action plan.Genome Med2016
28725475MINERVA-a platform for visualization and curation of molecular interaction networks.npj Systems Biology and Applications2016
27441714Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases.Big Data2016
27338147Making sense of big data in health research: Towards an EU action plan.Genome Med2016
26690135Bioinformatics Mining and Modeling Methods for the Identification of Disease Mechanisms in Neurodegenerative Disorders.Int J Mol Sci2015
25848931siRNA screen identifies QPCT as a druggable target for Huntington's disease.Nature Chemical Biology2015
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Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
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European Bioinformatics Institute (EMBL-EBI)
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