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Author Details

Bahram Samanfar
Agriculture and Agri-Food Canada
2011
42
13
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36527744IRES-mediated translation in bacteria.Biochem Biophys Res Commun2023
37670866Genome-wide analysis of cold imbibition stress in soybean, <i>Glycine max</i>.Front Plant Sci2023
37848601Species-specific microRNA discovery and target prediction in the soybean cyst nematode.Sci Rep2023
37790790Differential gene expression provides leads to environmentally regulated soybean seed protein content.Front Plant Sci2023
37409347Large-scale data mining pipeline for identifying novel soybean genes involved in resistance against the soybean cyst nematode.Front Bioinform2023
37108900A Correlation between 3'-UTR of <i>OXA1</i> Gene and Yeast Mitochondrial Translation.J Fungi (Basel)2023
37372372Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing.Genes (Basel)2023
36609461P-TarPmiR accurately predicts plant-specific miRNA targets.Sci Rep2023
36675300<i>DBP7</i> and <i>YRF1-6</i> Are Involved in Cell Sensitivity to LiCl by Regulating the Translation of <i>PGM2</i> mRNA.Int J Mol Sci2023
35205078A Broad Review of Soybean Research on the Ongoing Race to Overcome Soybean Cyst Nematode.Biology (Basel)2022
35406851Photoperiod Affects Node Appearance Rate and Flowering in Early Maturing Soybean.Plants (Basel)2022
35569766Discovery and identification of genes involved in DNA damage repair in yeast.Gene2022
35598219Lithium chloride sensitivity connects the activity of PEX11 and RIM20 to the translation of PGM2 and other mRNAs with structured 5'-UTRs.Mol Cell Biochem2022
35567147Novel QTL for Low Seed Cadmium Accumulation in Soybean.Plants (Basel)2022
36613666A Multi-Year, Multi-Cultivar Approach to Differential Expression Analysis of High- and Low-Protein Soybean (<i>Glycine max</i>).Int J Mol Sci2022
36145738GmSWEET29 and Paralog GmSWEET34 Are Differentially Expressed between Soybeans Grown in Eastern and Western Canada.Plants (Basel)2022
36004308A computational approach to rapidly design peptides that detect SARS-CoV-2 surface protein S.NAR Genom Bioinform2022
33386860Identifying new variation at the J locus, previously identified as e6, in long juvenile 'Paranagoiana' soybean.Theor Appl Genet2021
34582199Human-Soybean Allergies: Elucidation of the Seed Proteome and Comprehensive Protein-Protein Interaction Prediction.J Proteome Res2021
34244791The conserved Tpk1 regulates non-homologous end joining double-strand break repair by phosphorylation of Nej1, a homolog of the human XLF.Nucleic Acids Res2021
32639961Sensitivity of yeast to lithium chloride connects the activity of YTA6 and YPR096C to translation of structured mRNAs.PLoS One2020
31996697PIPE4: Fast PPI Predictor for Comprehensive Inter- and Cross-Species Interactomes.Sci Rep2020
32785068Lithium Chloride Sensitivity in Yeast and Regulation of Translation.Int J Mol Sci2020
30660105In Silico Engineering of Synthetic Binding Proteins from Random Amino Acid Sequences.iScience2019
31873115Genetic Analysis of High Protein Content in 'AC Proteus' Related Soybean Populations Using SSR, SNP, DArT and DArTseq Markers.Sci Rep2019
28987344Uncharacterized ORF HUR1 influences the efficiency of non-homologous end-joining repair in Saccharomyces cerevisiae.Gene2018
30231023Heavy metal sensitivities of gene deletion strains for ITT1 and RPS1A connect their activities to the expression of URE2, a key gene involved in metal detoxification in yeast.PLoS One2018
29554091Zinc oxide and silver nanoparticles toxicity in the baker's yeast, Saccharomyces cerevisiae.PLoS One2018
27832313Mapping and identification of a potential candidate gene for a novel maturity locus, E10, in soybean.Theor Appl Genet2017
29158977The sensitivity of the yeast, <i>Saccharomyces cerevisiae</i>, to acetic acid is influenced by <i>DOM34</i> and <i>RPL36A</i>.PeerJ2017
29112936Designing anti-Zika virus peptides derived from predicted human-Zika virus protein-protein interactions.Comput Biol Chem2017
27732863Systematic Genetic Screens Reveal the Dynamic Global Functional Organization of the Bacterial Translation Machinery.Cell Rep2016
28090422Elevated levels of ribosomal proteins eL36 and eL42 control expression of Hsp90 in rhabdomyosarcoma.Translation (Austin)2016
25316676Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli.Bioinformatics2015
25963654Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining.Mol Cell Biol2015
24498054Phosphatase complex Pph3/Psy2 is involved in regulation of efficient non-homologous end-joining pathway in the yeast Saccharomyces cerevisiae.PLoS One2014
25492630Efficient prediction of human protein-protein interactions at a global scale.BMC Bioinformatics2014
24586182Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli.PLoS Genet2014
24535059A global investigation of gene deletion strains that affect premature stop codon bypass in yeast, Saccharomyces cerevisiae.Mol Biosyst2014
23467670Large-scale investigation of oxygen response mutants in Saccharomyces cerevisiae.Mol Biosyst2013
22355752Short Co-occurring Polypeptide Regions Can Predict Global Protein Interaction Maps.Sci Rep2012
22646215Recent advances in protein-protein interaction prediction: experimental and computational methods.Expert Opin Drug Discov2011
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Collaborators

Ottawa Institute of Systems Biology, Carleton University
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Co-authored papers 19
Department of Biology and Ottawa Institute of Systems Biology, Carleton University
Co-authored papers 17
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Co-authored papers 14
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Co-authored papers 14
Carleton University
Co-authored papers 11
University of Regina
Co-authored papers 8
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Co-authored papers 8
Carleton University
Co-authored papers 6
University of Regina
Co-authored papers 5
University of Regina
Co-authored papers 3
Boston University School of Medicine, Boston University
Co-authored papers 3
University of Northern British Columbia
Co-authored papers 3
University of Regina
Co-authored papers 3
West China Hospital, Sichuan University
Co-authored papers 3
University of Toronto, University of Regina
Co-authored papers 2
Ottawa Hospital Research Institute
Co-authored papers 2
University of Toronto
Co-authored papers 2
Bhabha Atomic Research Centre
Co-authored papers 2
College Street, University of Toronto
Co-authored papers 2
University of Ottawa
Co-authored papers 1
University of California San Francisco
Co-authored papers 1
European Bioinformatics Institute
Co-authored papers 1
University of Toronto
Co-authored papers 1
College of Medicine, University of Saskatchewan
Co-authored papers 1
Ottawa Hospital Research Institute
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Sloan Kettering Institute
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College of Medicine, University of Saskatchewan
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The Hospital for Sick Children
Co-authored papers 1
Institute of Applied Materials Science, Vietnam Academy of Science and Technology
Co-authored papers 1