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Author Details

Diana Domanska
University of Oslo
2017
19
9
Nathan Sheffield (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37467208hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks.PLoS One2023
35047825A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer.NAR Cancer2022
37889009Cellsnake: a user-friendly tool for single-cell RNA sequencing analysis.Gigascience2022
35792514Exposure to a human relevant mixture of persistent organic pollutants or to perfluorooctane sulfonic acid alone dysregulates the developing cerebellum of chicken embryo.Environ Int2022
34850127MirGeneDB 2.1: toward a complete sampling of all major animal phyla.Nucleic Acids Res2022
35139155Single-cell transcriptomic analysis of human colonic macrophages reveals niche-specific subsets.J Exp Med2022
34316697Erratum: The uracil-DNA glycosylase UNG protects the fitness of normal and cancer B cells expressing AID.NAR Cancer2021
34752468Comparing the epigenetic landscape in myonuclei purified with a PCM1 antibody from a fast/glycolytic and a slow/oxidative muscle.PLoS Genet2021
31598695MirGeneDB 2.0: the metazoan microRNA complement.Nucleic Acids Res2020
33554121The uracil-DNA glycosylase UNG protects the fitness of normal and cancer B cells expressing AID.NAR Cancer2020
31642479MirGeneDB 2.0: the metazoan microRNA complement.Nucleic Acids Res2020
31624847Beware the Jaccard: the choice of similarity measure is important and non-trivial in genomic colocalisation analysis.Brief Bioinform2020
30547739Mind the gaps: overlooking inaccessible regions confounds statistical testing in genome analysis.BMC Bioinformatics2018
29873782Coloc-stats: a unified web interface to perform colocalization analysis of genomic features.Nucleic Acids Res2018
28521741The rainfall plot: its motivation, characteristics and pitfalls.BMC Bioinformatics2017
28775312Uracil Accumulation and Mutagenesis Dominated by Cytosine Deamination in CpG Dinucleotides in Mice Lacking UNG and SMUG1.Sci Rep2017
28911336Genome build information is an essential part of genomic track files.Genome Biol2017
29284043Complex patterns of concomitant medication use: A study among Norwegian women using paracetamol during pregnancy.PLoS One2017
28459977GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome.Gigascience2017
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Collaborators

Geir Kjetil Sandve
University of Oslo
Co-authored papers 9
Eivind Hovig
Center for Bioinformatics, University of Oslo
Co-authored papers 8
Sveinung Gundersen
Center for Bioinformatics, University of Oslo
Co-authored papers 3
Kevin J Peterson
Dartmouth College
Co-authored papers 3
Chakravarthi Kanduri
University of Oslo
Co-authored papers 3
Boris Simovski
University of Oslo
Co-authored papers 3
Anthony Mathelier
University of Oslo
Co-authored papers 3
Ingrid K Glad
University of Oslo
Co-authored papers 2
Daniel Vod??k
Institute for Cancer Research, Oslo University Hospital
Co-authored papers 2
Egil Ferkingstad
Co-authored papers 2
Marie-Jos??e H??bert
Universite de Montreal
Co-authored papers 2
Marit Holden
University of Mainz
Co-authored papers 1
Ryan M Layer
Boulder and BioFrontiers Institute, University of Colorado Boulder
Co-authored papers 1
Ludmil B Alexandrov
Moores Cancer Center, university of california san diego
Co-authored papers 1
Nathan Sheffield (CM4AI)
University of Virginia
Co-authored papers 1
Aaron R Quinlan
University of Utah
Co-authored papers 1
Sigve Nakken
University of Oslo
Co-authored papers 1
Andrey A Mironov
Lomonosov Moscow State University
Co-authored papers 1
Francisco Vega
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Alexander V Favorov
Johns Hopkins School of Medicine
Co-authored papers 1
Lara Bossini-Castillo
Departamento de Genetica e Instituto de Biotecnologia, Universidad de Granada
Co-authored papers 1
Maria Chikina
University of Pittsburgh
Co-authored papers 1
Gosia Trynka
Wellcome Sanger Institute
Co-authored papers 1
Christoph Bock
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 1
Dmytro Titov
Center for Bioinformatics, University of Oslo (UiO)
Co-authored papers 1
Finn Drabl??s
NTNU - Norwegian University of Science and Technology
Co-authored papers 1
Release 1.2