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Author Details

John Kenneth Baillie
Roslin Institute, University of Edinburgh
2005
152
43
PMIDPaper TitleJournal TitlePublished Year
36261315Fewer COVID-19 Neurological Complications with Dexamethasone and Remdesivir.Ann Neurol2023
37975844Evaluation of an Automated Choroid Segmentation Algorithm in a Longitudinal Kidney Donor and Recipient Cohort.Transl Vis Sci Technol2023
37604847The non-classical major histocompatibility complex II protein SLA-DM is crucial for African swine fever virus replication.Sci Rep2023
37968269Evaluation of pragmatic oxygenation measurement as a proxy for Covid-19 severity.Nat Commun2023
35449394Comparison of UK paediatric SARS-CoV-2 admissions across the first and second pandemic waves.Pediatr Res2023
37391265Patient emergency health-care use before hospital admission for COVID-19 and long-term outcomes in Scotland: a national cohort study.Lancet Digit Health2023
37390223HLA-E-restricted SARS-CoV-2-specific T cells from convalescent COVID-19 patients suppress virus replication despite HLA class Ia down-regulation.Sci Immunol2023
37255989Recovery from Covid-19 critical illness: A secondary analysis of the ISARIC4C CCP-UK cohort study and the RECOVER trial.J Intensive Care Soc2023
37056776SARS-CoV-2 antibody responses associate with sex, age and disease severity in previously uninfected people admitted to hospital with COVID-19: An ISARIC4C prospective study.Front Immunol2023
37082716Corrigendum: The molecular basis of differential host responses to avian influenza viruses in avian species with differing susceptibility.Front Cell Infect Microbiol2023
37235648CAGE sequencing reveals CFTR-dependent dysregulation of type I IFN signaling in activated cystic fibrosis macrophages.Sci Adv2023
37478012Kynurenine monooxygenase regulates inflammation during critical illness and recovery in experimental acute pancreatitis.Cell Rep2023
36926515The molecular basis of differential host responses to avian influenza viruses in avian species with differing susceptibility.Front Cell Infect Microbiol2023
36889308Variation in ERAP2 has opposing effects on severe respiratory infection and autoimmune disease.Am J Hum Genet2023
36724365NRF2 Activation Reprograms Defects in Oxidative Metabolism to Restore Macrophage Function in Chronic Obstructive Pulmonary Disease.Am J Respir Crit Care Med2023
36719907Outcome of COVID-19 in hospitalised immunocompromised patients: An analysis of the WHO ISARIC CCP-UK prospective cohort study.PLoS Med2023
36716318Therapeutic potential of IL6R blockade for the treatment of sepsis and sepsis-related death: A Mendelian randomisation study.PLoS Med2023
36457159Residual Lung Abnormalities after COVID-19 Hospitalization: Interim Analysis of the UKILD Post-COVID-19 Study.Am J Respir Crit Care Med2023
36797482Comorbidities, multimorbidity and COVID-19.Nat Med2023
36175370Alternative pathway dysregulation in tissues drives sustained complement activation and predicts outcome across the disease course in COVID-19.Immunology2023
34810237Prospective validation of the 4C prognostic models for adults hospitalised with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol.Thorax2022
35608920Fatal COVID-19 outcomes are associated with an antibody response targeting epitopes shared with endemic coronaviruses.JCI Insight2022
35344735SARS-CoV-2 co-infection with influenza viruses, respiratory syncytial virus, or adenoviruses.Lancet2022
35503092<sup>1</sup>H NMR Signals from Urine Excreted Protein Are a Source of Bias in Probabilistic Quotient Normalization.Anal Chem2022
35639883Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers.Gigascience2022
35667482Mapping of SARS-CoV-2 IgM and IgG in gingival crevicular fluid: Antibody dynamics and linkage to severity of COVID-19 in hospital inpatients.J Infect2022
35531376Procalcitonin Is Not a Reliable Biomarker of Bacterial Coinfection in People With Coronavirus Disease 2019 Undergoing Microbiological Investigation at the Time of Hospital Admission.Open Forum Infect Dis2022
35854097Author Correction: Hypoxia shapes the immune landscape in lung injury and promotes the persistence of inflammation.Nat Immunol2022
35491827Analysis of SARS-CoV-2 in Nasopharyngeal Samples from Patients with COVID-19 Illustrates Population Variation and Diverse Phenotypes, Placing the Growth Properties of Variants of Concern in Context with Other Lineages.mSphere2022
35690068Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity.Cell Syst2022
35715504Redefining critical illness.Nat Med2022
35624205Hypoxia shapes the immune landscape in lung injury and promotes the persistence of inflammation.Nat Immunol2022
35592326Pandemic, Epidemic, Endemic: B Cell Repertoire Analysis Reveals Unique Anti-Viral Responses to SARS-CoV-2, Ebola and Respiratory Syncytial Virus.Front Immunol2022
35387486Genetic Landscape of the ACE2 Coronavirus Receptor.Circulation2022
36062073Cystatin C is associated with adverse COVID-19 outcomes in diverse populations.iScience2022
36381618Viral Coinfections in Hospitalized Coronavirus Disease 2019 Patients Recruited to the International Severe Acute Respiratory and Emerging Infections Consortium WHO Clinical Characterisation Protocol UK Study.Open Forum Infect Dis2022
36327219Exome-wide association study to identify rare variants influencing COVID-19 outcomes: Results from the Host Genetics Initiative.PLoS Genet2022
36094347Systematic comparison of ranking aggregation methods for gene lists in experimental results.Bioinformatics2022
36322788A Hybrid Architecture (CO-CONNECT) to Facilitate Rapid Discovery and Access to Data Across the United Kingdom in Response to the COVID-19 Pandemic: Development Study.J Med Internet Res2022
35258397The V-ATPase complex regulates non-canonical Atg8-family protein lipidation through ATG16L1 recruitment.Autophagy2022
34889978Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severity.Hum Genet2022
35250627Soluble P-Selectin and von Willebrand Factor Rise in Healthy Volunteers Following Non-exertional Ascent to High Altitude.Front Physiol2022
34911741Impact of cardiometabolic multimorbidity and ethnicity on cardiovascular/renal complications in patients with COVID-19.Heart2022
35275994Admission Blood Glucose Level and Its Association With Cardiovascular and Renal Complications in Patients Hospitalized With COVID-19.Diabetes Care2022
35027740Multi-ancestry fine mapping implicates OAS1 splicing in risk of severe COVID-19.Nat Genet2022
35081335SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses.Cell2022
35104687A common TMPRSS2 variant has a protective effect against severe COVID-19.Curr Res Transl Med2022
35077719Detection and quantification of antibody to SARS CoV 2 receptor binding domain provides enhanced sensitivity, specificity and utility.J Virol Methods2022
34710339Tissue Proteomic Analysis Identifies Mechanisms and Stages of Immunopathology in Fatal COVID-19.Am J Respir Cell Mol Biol2022
34737194SARS-CoV-2 environmental contamination from hospitalised patients with COVID-19 receiving aerosol-generating procedures.Thorax2022
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Collaborators

Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 15
The Roslin Institute, University of Edinburgh
Co-authored papers 13
RIKEN Center for Integrative Medical Sciences
Co-authored papers 11
Mater Research Institute-University of Queensland, Translational Research Institute
Co-authored papers 10
RIKEN Center for Integrative Medical Sciences
Co-authored papers 9
Center for Integrative Medical Sciences
Co-authored papers 9
Mater Research Institute - University of Queensland
Co-authored papers 9
RIKEN Center for Integrative Medical Sciences
Co-authored papers 9
International Institute of Molecular and Cell Biology in Warsaw
Co-authored papers 8
Telethon Kids Institute, University of Western Australia
Co-authored papers 7
RIKEN Center for Integrative Medical Sciences
Co-authored papers 7
University of Copenhagen
Co-authored papers 6
RIKEN Center for Integrative Medical Sciences (IMS)
Co-authored papers 6
University Hospital Regensburg
Co-authored papers 6
RIKEN Center for Integrative Medical Sciences
Co-authored papers 6
University Bordeaux, CNRS
Co-authored papers 6
University of Copenhagen
Co-authored papers 5
RIKEN Center for Integrative Medical Sciences
Co-authored papers 5
Co-authored papers 5
Saint John's Cancer Institute at Saint John's Health Center
Co-authored papers 5
Center for Integrative Medical Sciences
Co-authored papers 5
The University of Melbourne
Co-authored papers 5
McGill University
Co-authored papers 5
Columbia University
Co-authored papers 5
Cerevance Ltd
Co-authored papers 5
German Center for Neurodegenerative Diseases (DZNE).
Co-authored papers 5
Nagoya City University Graduate School of Medical Sciences
Co-authored papers 5
European Bioinformatics Institute
Co-authored papers 4
Institute of Genetics and Cancer, University of Edinburgh
Co-authored papers 4
Karolinska Institute
Co-authored papers 4