Author details

Full Name

Ghia Euskirchen

Affiliation

ORCID

Career Start Year

1994

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
28126923	Bisulfite-independent analysis of CpG island methylation enables genome-scale stratification of single cells.	Nucleic Acids Res	2017
28003475	Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors.	Nucleic Acids Res	2017
27005435	Individual heritable differences result in unique cell lymphocyte receptor repertoires of naÃ¯ve and antigen-experienced cells.	Nat Commun	2016
26300125	Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions.	Cell	2015
26004630	Transcriptome Signature and Regulation in Human Somatic Cell Reprogramming.	Stem Cell Reports	2015
25409824	A comparative encyclopedia of DNA elements in the mouse genome.	Nature	2014
25549968	Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.	Mol Syst Biol	2014
25409826	Principles of regulatory information conservation between mouse and human.	Nature	2014
23267071	Two methods for full-length RNA sequencing for low quantities of cells and single cells.	Proc Natl Acad Sci U S A	2013
23908239	Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females.	Science	2013
23836664	Functional genomic screen of human stem cell differentiation reveals pathways involved in neurodevelopment and neurodegeneration.	Proc Natl Acad Sci U S A	2013
23830146	Whole-exome sequencing identifies tetratricopeptide repeat domain 7A (TTC7A) mutations for combined immunodeficiency with intestinal atresias.	J Allergy Clin Immunol	2013
22265404	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.	Cell	2012
22424236	Personal omics profiling reveals dynamic molecular and medical phenotypes.	Cell	2012
22955991	ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia.	Genome Res	2012
22955619	Architecture of the human regulatory network derived from ENCODE data.	Nature	2012
22952240	SWI/SNF chromatin-remodeling factors: multiscale analyses and diverse functions.	J Biol Chem	2012
21947028	Performance comparison of exome DNA sequencing technologies.	Nat Biotechnol	2011
21408204	Diverse roles and interactions of the SWI/SNF chromatin remodeling complex revealed using global approaches.	PLoS Genet	2011
20368969	Molecular mechanisms of ethanol-induced pathogenesis revealed by RNA-sequencing.	PLoS Pathog	2010
20683474	Evidence against a genomic code for nucleosome positioning. Reply to "Nucleosome sequence preferences influence in vivo nucleosome organization.".	Nat Struct Mol Biol	2010
21177976	Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.	Science	2010
20810668	Comprehensive annotation of the transcriptome of the human fungal pathogen Candida albicans using RNA-seq.	Genome Res	2010
20133578	X chromosome-wide analyses of genomic DNA methylation states and gene expression in male and female neutrophils.	Proc Natl Acad Sci U S A	2010
19706456	Mapping accessible chromatin regions using Sono-Seq.	Proc Natl Acad Sci U S A	2009
19122651	PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls.	Nat Biotechnol	2009
19620965	Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo.	Nat Struct Mol Biol	2009
19159457	Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.	BMC Genomics	2009
18173853	Systematic analysis of transcribed loci in ENCODE regions using RACE sequencing reveals extensive transcription in the human genome.	Genome Biol	2008
18258921	Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets.	Genome Res	2008
18787082	Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding.	Genome Res	2008
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
17568006	Mapping the chromosomal targets of STAT1 by Sequence Tag Analysis of Genomic Enrichment (STAGE).	Genome Res	2007
17568005	Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies.	Genome Res	2007
17558387	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing.	Nat Methods	2007
15054485	A plethora of sites.	Nat Genet	2004
15165172	Integrative approaches in molecular medicine.	Pharmacogenomics	2004
15082775	CREB binds to multiple loci on human chromosome 22.	Mol Cell Biol	2004
12600945	The transcriptional activity of human Chromosome 22.	Genes Dev	2003
15338632	Identification of novel functional elements in the human genome.	Cold Spring Harb Symp Quant Biol	2003
14527995	Distribution of NF-kappaB-binding sites across human chromosome 22.	Proc Natl Acad Sci U S A	2003
12455957	Nnf1p, Dsn1p, Mtw1p, and Nsl1p: a new group of proteins important for chromosome segregation in Saccharomyces cerevisiae.	Eukaryotic Cell	2002
9247195	NNF1 is an essential yeast gene required for proper spindle orientation, nucleolar and nuclear envelope structure and mRNA export.	Journal of Cell Science	1997
8303295	Green fluorescent protein as a marker for gene expression.	Science	1994