Author details

Full Name

Yanxiao Zhang

Affiliation

ORCID

Career Start Year

2014

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37505983	Chromosomal inversion polymorphisms shape human brain morphology.	Cell Rep	2023
37081156	Topologically associating domain boundaries are required for normal genome function.	Commun Biol	2023
36817700	Human-gained heart enhancers are associated with species-specific cardiac attributes.	Nat Cardiovasc Res	2022
36207411	Single-cell epigenome analysis reveals age-associated decay of heterochromatin domains in excitatory neurons in the mouse brain.	Cell Res	2022
34446921	SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data.	Nat Methods	2021
34293321	Proteome plasticity in response to persistent environmental change.	Mol Cell	2021
33637727	Comprehensive analysis of single cell ATAC-seq data with SnapATAC.	Nat Commun	2021
33589836	Joint profiling of histone modifications and transcriptome in single cells from mouse brain.	Nat Methods	2021
34002095	CTCF mediates dosage- and sequence-context-dependent transcriptional insulation by forming local chromatin domains.	Nat Genet	2021
33990324	Cardiac cell type-specific gene regulatory programs and disease risk association.	Sci Adv	2021
33398137	Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development.	Nature	2021
33037424	Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development.	Nature	2020
32406560	Significant association between host transcriptome-derived HPV oncogene E6* influence score and carcinogenic pathways, tumor size, and survival in head and neck cancer.	Head Neck	2020
32220301	Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation.	Cancer Cell	2020
31384045	Joint profiling of DNA methylation and chromatin architecture in single cells.	Nat Methods	2019
30986246	MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.	PLoS Comput Biol	2019
31492772	Degeneration of Injured Axons and Dendrites Requires Restraint of a Protective JNK Signaling Pathway by the Transmembrane Protein Raw.	Journal of Neuroscience	2019
31427791	Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells.	Nat Genet	2019
29497140	Author Correction: Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation.	Nat Neurosci	2018
28928286	HPV Integration in HNSCC Correlates with Survival Outcomes, Immune Response Signatures, and Candidate Drivers.	Mol Cancer Res	2018
30061624	Expressed HNSCC variants by HPV-status in a well-characterized Michigan cohort.	Scientific Reports	2018
29434377	Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation.	Nat Neurosci	2018
28215080	A Scalable Epitope Tagging Approach for High Throughput ChIP-Seq Analysis.	ACS Synth Biol	2017
28008156	Genomic binding of PAX8-PPARG fusion protein regulates cancer-related pathways and alters the immune landscape of thyroid cancer.	Oncotarget	2017
27091409	Subtypes of HPV-Positive Head and Neck Cancers Are Associated with HPV Characteristics, Copy Number Alterations, PIK3CA Mutation, and Pathway Signatures.	Clin Cancer Res	2016
27435678	Adipogenic Differentiation of Thyroid Cancer Cells Through the Pax8-PPARÎ³ Fusion Protein Is Regulated by Thyroid Transcription Factor 1 (TTF-1).	Journal of Biological Chemistry	2016
26595524	Genomic binding and regulation of gene expression by the thyroid carcinoma-associated PAX8-PPARG fusion protein.	Oncotarget	2015
24894502	PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.		2014