Skip to Main Content

Author Details

Rehan Akbani
The University of Texas MD Anderson Cancer Center
2013
69
45
PMIDPaper TitleJournal TitlePublished Year
37744342Chimeric RNAs reveal putative neoantigen peptides for developing tumor vaccines for breast cancer.Front Immunol2023
37744342Chimeric RNAs reveal putative neoantigen peptides for developing tumor vaccines for breast cancer.Front Immunol2023
37527013SETD2 Loss and ATR Inhibition Synergize to Promote cGAS Signaling and Immunotherapy Response in Renal Cell Carcinoma.Clin Cancer Res2023
37527013SETD2 Loss and ATR Inhibition Synergize to Promote cGAS Signaling and Immunotherapy Response in Renal Cell Carcinoma.Clin Cancer Res2023
36332624Tumor-intrinsic SIRPA promotes sensitivity to checkpoint inhibition immunotherapy in melanoma.Cancer Cell2022
36205581RPPA SPACE: an R package for normalization and quantitation of Reverse-Phase Protein Array data.Bioinformatics2022
36332624Tumor-intrinsic SIRPA promotes sensitivity to checkpoint inhibition immunotherapy in melanoma.Cancer Cell2022
35349735Consensus subtypes of hepatocellular carcinoma associated with clinical outcomes and genomic phenotypes.Hepatology2022
35349735Consensus subtypes of hepatocellular carcinoma associated with clinical outcomes and genomic phenotypes.Hepatology2022
36205581RPPA SPACE: an R package for normalization and quantitation of Reverse-Phase Protein Array data.Bioinformatics2022
31504175NExUS: Bayesian simultaneous network estimation across unequal sample sizes.Bioinformatics2020
32374631Personalized Network Modeling of the Pan-Cancer Patient and Cell Line Interactome.JCO Clin Cancer Inform2020
31851289SAMMI: a semi-automated tool for the visualization of metabolic networks.Bioinformatics2020
33157050Large-Scale Characterization of Drug Responses of Clinically Relevant Proteins in Cancer Cell Lines.Cancer Cell2020
31504175NExUS: Bayesian simultaneous network estimation across unequal sample sizes.Bioinformatics2020
31851289SAMMI: a semi-automated tool for the visualization of metabolic networks.Bioinformatics2020
33157050Large-Scale Characterization of Drug Responses of Clinically Relevant Proteins in Cancer Cell Lines.Cancer Cell2020
32374631Personalized Network Modeling of the Pan-Cancer Patient and Cell Line Interactome.JCO Clin Cancer Inform2020
31068700Next-generation characterization of the Cancer Cell Line Encyclopedia.Nature2019
31820388Generation of Raw RPPA Data and Their Conversion to Analysis-Ready Data.Adv Exp Med Biol2019
31820386Analytical Platforms 3: Processing Samples via the RPPA Pipeline to Generate Large-Scale Data for Clinical Studies.Adv Exp Med Biol2019
31509758Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas.Cell Rep2019
31178611Bayesian Hierarchical Varying-sparsity Regression Models with Application to Cancer Proteogenomics.J Am Stat Assoc2019
31477280Identification and validation of a prognostic proteomic signature for cervical cancer.Gynecol Oncol2019
31068700Next-generation characterization of the Cancer Cell Line Encyclopedia.Nature2019
31365877Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas.Cell Rep2019
31201206TCPA v3.0: An Integrative Platform to Explore the Pan-Cancer Analysis of Functional Proteomic Data.Mol Cell Proteomics2019
31820388Generation of Raw RPPA Data and Their Conversion to Analysis-Ready Data.Adv Exp Med Biol2019
31820386Analytical Platforms 3: Processing Samples via the RPPA Pipeline to Generate Large-Scale Data for Clinical Studies.Adv Exp Med Biol2019
31178611Bayesian Hierarchical Varying-sparsity Regression Models with Application to Cancer Proteogenomics.J Am Stat Assoc2019
31201206TCPA v3.0: An Integrative Platform to Explore the Pan-Cancer Analysis of Functional Proteomic Data.Mol Cell Proteomics2019
31509758Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas.Cell Rep2019
31365877Integrated Analysis of TP53 Gene and Pathway Alterations in The Cancer Genome Atlas.Cell Rep2019
31477280Identification and validation of a prognostic proteomic signature for cervical cancer.Gynecol Oncol2019
28918914Analysis of Genomes and Transcriptomes of Hepatocellular Carcinomas Identifies Mutations and Gene Expression Changes in the Transforming Growth Factor-β Pathway.Gastroenterology2018
28918914Analysis of Genomes and Transcriptomes of Hepatocellular Carcinomas Identifies Mutations and Gene Expression Changes in the Transforming Growth Factor-β Pathway.Gastroenterology2018
30268436A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-β Superfamily.Cell Syst2018
29925010The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma.Cell Rep2018
30297783Personalized Integrated Network Modeling of the Cancer Proteome Atlas.Sci Rep2018
30096301Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer.Cell2018
30322867Integrative Molecular Characterization of Malignant Pleural Mesothelioma.Cancer Discov2018
29898407Integrated Molecular Characterization of Testicular Germ Cell Tumors.Cell Rep2018
29625049Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics.Cell2018
29625048Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer.Cell2018
29716986Credentialing Individual Samples for Proteogenomic Analysis.Mol Cell Proteomics2018
29622466Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas.Cancer Cell2018
29622464A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers.Cancer Cell2018
29617669The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma.Cell Rep2018
29617664Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas.Cell Rep2018
29617660Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas.Cell Rep2018
  • 1 - 50 of 138

Recommended Authors

Rohan Bareja
Case Western Reserve University
Career Start Year 2017
Number of shared co-authors 5
Raunak Shrestha
University of California San Francisco
Career Start Year 2014
Number of shared co-authors 4
Gian Luca Negri
British Columbia Cancer Research Institute
Career Start Year 2013
Number of shared co-authors 9
Elana J Fertig
Johns Hopkins University School of Medicine
Career Start Year 2010
Number of shared co-authors 15
Vladimir Ignatchenko
Margaret Cancer Center
Career Start Year 2009
Number of shared co-authors 1
Sungyong You
Cedars-Sinai Medical Center
Career Start Year 2008
Number of shared co-authors 1
Karolina Edlund
Leibniz Research Centre for Working Environment and Human Factors at TU Dortmund
Career Start Year 2008
Number of shared co-authors 0
James C Costello
University of Colorado Anschutz Medical Campus
Career Start Year 2006
Number of shared co-authors 11
Matti Nykter
Prostate Cancer Research Center, Tampere University and Tays Cancer Center
Career Start Year 2006
Number of shared co-authors 23
Pichai Raman
Center for Data-Driven Discovery in Biomedicine, Children's Hospital of Philadelphia
Career Start Year 2006
Number of shared co-authors 23
Bing Zhang
Baylor College of Medicine
Career Start Year 2005
Number of shared co-authors 23
Mariaelena Pierobon
Center for Applied Proteomics and Molecular Medicine, George Mason University
Career Start Year 2004
Number of shared co-authors 4
Steffen Durinck
Genentech Inc.
Career Start Year 2004
Number of shared co-authors 14
Benjamin Haibe-Kains
Princess Margaret Cancer Centre, University Health Network
Career Start Year 2004
Number of shared co-authors 11
Aik Choon Tan
Huntsman Cancer Institute, The University of Utah
Career Start Year 2003
Number of shared co-authors 3
Obi L Griffith
Washington University
Career Start Year 2003
Number of shared co-authors 52
Syed Haider
Institute of Cancer Research
Career Start Year 2002
Number of shared co-authors 15
Olivier Elemento
Meyer Cancer Center
Career Start Year 2002
Number of shared co-authors 50
Habib Hamidi
Genentech Inc.
Career Start Year 2002
Number of shared co-authors 4
Yidong Chen
The University of Texas Health Science Center at San Antonio
Career Start Year 2001
Number of shared co-authors 13
Sooryanarayana Varambally
University of Alabama at Birmingham, USA O'Neal Comprehensive Cancer Center
Career Start Year 2001
Number of shared co-authors 5
Lodewyk F A Wessels
University Medical Centre Mannheim, University of Heidelberg
Career Start Year 2000
Number of shared co-authors 25
Andrea Sboner
Institute for Computational Biomedicine
Career Start Year 2000
Number of shared co-authors 29
Tamar Geiger
Tel Aviv University
Career Start Year 2000
Number of shared co-authors 1
Aedin C Culhane
Dana-Farber Cancer Institute & Harvard School of Public Health
Career Start Year 1996
Number of shared co-authors 41
Donald J Johann
Winthrop P. Rockefeller Cancer Institute, University of Arkansas for Medical Sciences
Career Start Year 1996
Number of shared co-authors 2
Jan Budczies
Institute of Pathology, University Hospital Heidelberg
Career Start Year 1996
Number of shared co-authors 1
Arul M Chinnaiyan
University of Michigan Medical School.
Career Start Year 1993
Number of shared co-authors 51
Luigi Marchionni
Weill-Cornell School of Medicine
Career Start Year 1989
Number of shared co-authors 12
Paul C Boutros
University of California los angeles
Career Start Year 1970
Number of shared co-authors 71

Collaborators

Gordon B Mills
Knight Cancer Institute, Oregon Health and Sciences University
Co-authored papers 34
John N Weinstein
The University of Texas MD Anderson Cancer Center
Co-authored papers 27
Andrew D Cherniack
Dana-Farber Cancer Institute
Co-authored papers 26
Yiling Lu
Co-authored papers 23
Amy G Robertson
Present address: Dxige Research Inc.
Co-authored papers 22
Katherine A Hoadley
Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill
Co-authored papers 20
Peter W Laird
Van Andel Institute
Co-authored papers 16
David A Wheeler
Baylor College of Medicine
Co-authored papers 15
Reanne Bowlby
Co-authored papers 14
Han Liang
MD Anderson Cancer Center
Co-authored papers 13
Roel G W Verhaak
Yale School of Medicine
Co-authored papers 11
Shiyun Ling
Co-authored papers 11
Hui Shen
Van Andel Institute
Co-authored papers 11
Matthew Meyerson
Broad Institute
Co-authored papers 10
Tara M Lichtenberg
Co-authored papers 10
Yuexin Liu
The University of Texas MD Anderson Cancer Center
Co-authored papers 10
Zhenlin Ju
Co-authored papers 10
Jaegil Kim
Co-authored papers 10
Christina Yau
University of California San Francisco
Co-authored papers 8
Chad J Creighton
Co-authored papers 8
Joshua M Stuart
University of California at Santa Cruz
Co-authored papers 8
Gad Getz
Broad Institute of the Massachusetts Institute of Technology and Harvard
Co-authored papers 8
Jean Claude Zenklusen
National Cancer Institute
Co-authored papers 8
Wenbin Liu
Co-authored papers 8
Akinyemi I Ojesina
University of Alabama at Birmingham
Co-authored papers 7
Kristen Leraas
Nationwide Children's Hospital
Co-authored papers 7
Chandra Sekhar Pedamallu
Broad Institute
Co-authored papers 7
Toni K Choueiri
Dana-Farber Cancer Institute
Co-authored papers 7
Christopher C Benz
Buck Institute for Research on Aging
Co-authored papers 7
Alexander J Lazar
The University of Texas MD Anderson Cancer Center
Co-authored papers 7
Release 1.2