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Author Details

Kristen K Dang
Benaroya Research Institute at Virginia Mason
2006
25
20
PMIDPaper TitleJournal TitlePublished Year
34083538Crowdsourced mapping of unexplored target space of kinase inhibitors.Nat Commun2021
34520464Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge.PLoS Comput Biol2021
34146471A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery.Cell Syst2021
32668255Meta-Analysis of the Alzheimer's Disease Human Brain Transcriptome and Functional Dissection in Mouse Models.Cell Rep2020
33214875CRI iAtlas: an interactive portal for immuno-oncology research.F1000Res2020
33046718Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions.Sci Data2020
32755461Linked Entity Attribute Pair (LEAP): A Harmonization Framework for Data Pooling.JCO Clin Cancer Inform2020
30400818Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection.Genome Biol2018
27113501Practical Guidelines for High-Resolution Epigenomic Profiling of Nucleosomal Histones in Postmortem Human Brain Tissue.Biol Psychiatry2017
28350385Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives.Sci Data2017
29272700Multi-targeting Drug Community Challenge.Cell Chem Biol2017
27727239Human whole genome genotype and transcriptome data for Alzheimer's and other neurodegenerative diseases.Sci Data2016
27668389Gene expression elucidates functional impact of polygenic risk for schizophrenia.Nat Neurosci2016
24675517Global optimization of somatic variant identification in cancer genomes with a global community challenge.Nat Genet2014
25344726A narrow repertoire of transcriptional modules responsive to pyogenic bacteria is impaired in patients carrying loss-of-function mutations in MYD88 or IRAK4.Nat Immunol2014
24644022Modular transcriptional repertoire analyses of adults with systemic lupus erythematosus reveal distinct type I and type II interferon signatures.Arthritis Rheumatol2014
23435120The transcription factor STAT5 is critical in dendritic cells for the development of TH2 but not TH1 responses.Nat Immunol2013
23593004Comparison of SIV and HIV-1 genomic RNA structures reveals impact of sequence evolution on conserved and non-conserved structural motifs.PLoS Pathog2013
20195503Genome-wide mRNA expression correlates of viral control in CD4+ T-cells from HIV-1-infected individuals.PLoS Pathog2010
19019982Tissue-specific expression patterns of Arabidopsis NF-Y transcription factors suggest potential for extensive combinatorial complexity.Plant Physiol2009
19661910Architecture and secondary structure of an entire HIV-1 RNA genome.Nature2009
19812560CCL3L1 and HIV/AIDS susceptibility.Nat Med2009
18427205The molecular epidemiology of HIV-1 envelope diversity during HIV-1 subtype C vertical transmission in Malawian mother-infant pairs.AIDS2008
18535013Compensatory evolution in RNA secondary structures increases substitution rate variation among sites.Mol Biol Evol2008
16511495Sexual reproduction selects for robustness and negative epistasis in artificial gene networks.Nature2006
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Collaborators

Justin Guinney
University of Washington
Co-authored papers 6
Gustavo Stolovitzky
IBM T.J. Watson Research Center
Co-authored papers 4
Mette A Peters
Division of Clinical Research, Fred Hutchinson Cancer Research Center
Co-authored papers 4
Solveig K Sieberts
University of Washington
Co-authored papers 4
Ronald Swanstrom
Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill
Co-authored papers 4
Benjamin A Logsdon
Fred Hutchinson Cancer Research Center
Co-authored papers 4
James A Eddy
Benaroya Research Institute at Virginia Mason, Institute for Systems Biology, Sage Bionetworks, University of Illinois at Urbana-Champaign
Co-authored papers 4
Thanneer M Perumal
F. Hoffmann-La Roche Ltd
Co-authored papers 4
Lara M Mangravite
Children's Hospital Oakland Research Institute
Co-authored papers 4
Nil??fer Ertekin-Taner
Mayo Clinic
Co-authored papers 3
Yin Hu
Co-authored papers 3
Larsson Omberg
Cornell University
Co-authored papers 3
Andrew Lamb
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 3
Kyle Ellrott
Oregon Health & Science University
Co-authored papers 3
Philip L De Jager
Columbia University Medical Center
Co-authored papers 3
Xue Wang
Mayo Clinic
Co-authored papers 3
Joshua M Stuart
University of California at Santa Cruz
Co-authored papers 3
Avner Schlessinger
Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai
Co-authored papers 3
Paul C Boutros
University of California los angeles
Co-authored papers 3
Mariet Allen
Mayo Clinic
Co-authored papers 3
Thea Norman
Bill & Melinda Gates Foundation
Co-authored papers 3
Menachem Fromer
Co-authored papers 2
Adam A Margolin
Icahn School of Medicine
Co-authored papers 2
Amalio Telenti
Vir Biotechnology Inc.
Co-authored papers 2
Sara Mostafavi
University of British Columbia and BC Children's Hospital
Co-authored papers 2
Panos Roussos
Co-authored papers 2
Nathan D Price
Institute for Systems Biology
Co-authored papers 2
Stephen H Friend
University of Oxford
Co-authored papers 2
Robert J Allaway
Geisel School of Medicine, Dartmouth College
Co-authored papers 2
Winston Hide
Harvard Medical School
Co-authored papers 2
Release 1.2