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Author Details

Shur-Jen Wang
Medical College of Wisconsin
1996
51
21
PMIDPaper TitleJournal TitlePublished Year
36394234Representation of Pain Concepts and Terms in Existing Ontologies and Taxonomies.Pain Med2023
37119810Rare disease research resources at the Rat Genome Database.Genetics2023
37347557The Rat Genome Database: Genetic, Genomic, and Phenotypic Data Across Multiple Species.Curr Protoc2023
369307292022 updates to the Rat Genome Database: a Findable, Accessible, Interoperable, and Reusable (FAIR) resource.Genetics2023
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
36553571Ontological Analysis of Coronavirus Associated Human Genes at the COVID-19 Disease Portal.Genes (Basel)2022
35380657MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses.Genetics2022
31713623The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform.Nucleic Acids Res2020
30753478Integrated curation and data mining for disease and phenotype models at the Rat Genome Database.Database (Oxford)2019
31228152Rat Genome Databases, Repositories, and Tools.Methods Mol Biol2019
30938777Quantitative phenotype analysis to identify, validate and compare rat disease models.Database (Oxford)2019
29761460A Primer for the Rat Genome Database (RGD).Methods Mol Biol2018
27009807The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database.Database (Oxford)2016
27736745Exploring human disease using the Rat Genome Database.Dis Model Mech2016
27287925Comprehensive coverage of cardiovascular disease data in the disease portals at the Rat Genome Database.Physiol Genomics2016
25355511The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease.Nucleic Acids Res2015
27602200Disease, Models, Variants and Altered Pathways-Journeying RGD Through the Magnifying Glass.Comput Struct Biotechnol J2015
25632109PhenoMiner: a quantitative phenotype database for the laboratory rat, Rattus norvegicus. Application in hypertension and renal disease.Database (Oxford)2015
25619558OntoMate: a text-mining tool aiding curation at the Rat Genome Database.Database (Oxford)2015
24499703The pathway ontology - updates and applications.J Biomed Semantics2014
25265995Disease pathways at the Rat Genome Database Pathway Portal: genes in context-a network approach to understanding the molecular mechanisms of disease.Hum Genomics2014
25070993BC4GO: a full-text corpus for the BioCreative IV GO task.Database (Oxford)2014
25157073Overview of the gene ontology task at BioCreative IV.Database (Oxford)2014
23235564Chromosome substitution modulates resistance to ischemia reperfusion injury in Brown Norway rats.Kidney Int2013
24103152The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications.J Biomed Semantics2013
23881287Rat Genome Database: a unique resource for rat, human, and mouse quantitative trait locus data.Physiol Genomics2013
23603846PhenoMiner: quantitative phenotype curation at the rat genome database.Database (Oxford)2013
23794737Analysis of disease-associated objects at the Rat Genome Database.Database (Oxford)2013
23434633The Rat Genome Database 2013--data, tools and users.Brief Bioinform2013
22245243PDE4 regulates tissue plasminogen activator expression of human brain microvascular endothelial cells.Thromb Res2012
23255149Exploring genetic, genomic, and phenotypic data at the rat genome database.Curr Protoc Bioinformatics2012
22434847Ontology searching and browsing at the Rat Genome Database.Database (Oxford)2012
21296746RGD: a comparative genomics platform.Hum Genomics2011
22178875Tissue plasminogen activator expression and barrier properties of human brain microvascular endothelial cells.Cell Physiol Biochem2011
21868728Ancrod and fibrin formation: perspectives on mechanisms of action.Stroke2011
21321022The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data.Database (Oxford)2011
19956751The rat genome database curators: who, what, where, why.PLoS Comput Biol2009
18553401Epidermal growth factor promotes breast cancer cell chemotaxis in CXCL12 gradients.Biotechnol Bioeng2008
16688570A parallel-gradient microfluidic chamber for quantitative analysis of breast cancer cell chemotaxis.Biomed Microdevices2006
15909653Neutrophil migration in opposing chemoattractant gradients using microfluidic chemotaxis devices.Ann Biomed Eng2005
15159771Generation of dynamic temporal and spatial concentration gradients using microfluidic devices.Lab Chip2004
15178445Effective neutrophil chemotaxis is strongly influenced by mean IL-8 concentration.Biochem Biophys Res Commun2004
15383325Differential effects of EGF gradient profiles on MDA-MB-231 breast cancer cell chemotaxis.Exp Cell Res2004
14967413Astrocyte regulation of human brain capillary endothelial fibrinolysis.Thromb Res2003
11866539Identification of endothelial cell genes expressed in an in vitro model of angiogenesis: induction of ESM-1, (beta)ig-h3, and NrCAM.Microvasc Res2002
12513121Primitive endothelial cell lines from the porcine embryonic yolk sac.In Vitro Cell Dev Biol Anim2002
11069914The basic helix-loop-helix transcription factor HESR1 regulates endothelial cell tube formation.J Biol Chem2001
9700462Role of endothelium in the control of mouse yolk sac stem cell differentiation.Dev Comp Immunol1998
9365522Cell interactions in the mouse yolk sac: vasculogenesis and hematopoiesis.J Cell Physiol1997
8792159Isolation and propagation of yolk-sac-derived endothelial cells from a hypervascular transgenic mouse expressing a gain-of-function fps/fes proto-oncogene.In Vitro Cell Dev Biol Anim1996
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Collaborators

Medical College of Wisconsin
Co-authored papers 31
Medical College of Wisconsin
Co-authored papers 31
Medical College of Wisconsin
Co-authored papers 30
Medical College of Wisconsin
Co-authored papers 25
Medical College of Wisconsin
Co-authored papers 22
Medical College of Wisconsin
Co-authored papers 20
Medical College of Wisconsin and Marquette University
Co-authored papers 19
Medical College of Wisconsin
Co-authored papers 11
Genomics Research Center
Co-authored papers 11
Medical College of Wisconsin
Co-authored papers 7
Heersink School of Medicine, The University of Alabama at Birmingham
Co-authored papers 7
Medical College of Wisconsin
Co-authored papers 7
Medical College of Wisconsin
Co-authored papers 6
California Institute of Technology
Co-authored papers 3
Oxford e-Research Centre, University of Oxford
Co-authored papers 2
University of Missouri
Co-authored papers 2
Qilu University of Technology (Shandong Academy of Sciences)
Co-authored papers 2
National Center for Biotechnology Information, National Institutes of Health.
Co-authored papers 2
California Institute of Technology
Co-authored papers 2
Northwestern University
Co-authored papers 2
University of Delaware
Co-authored papers 2
European Bioinformatics Institute
Co-authored papers 2
Co-authored papers 1
Oregon State University
Co-authored papers 1
carnegie mellon university
Co-authored papers 1
Centre Medical Universitaire
Co-authored papers 1
Harvard University
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 1