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Author Details

Sriram Chandrasekaran
University of Michigan ann arbor
2010
55
20
PMIDPaper TitleJournal TitlePublished Year
35304691Anthocyanin: A Natural Dye Extracted from Hibiscus Sabdariffa (L.) for Textile and Dye Industries.Appl Biochem Biotechnol2023
37854701Metabolic stratification of human breast tumors reveal subtypes of clinical and therapeutic relevance.iScience2023
37310520Correction: Single-cell RNA-sequencing identifies anti-cancer immune phenotypes in the early lung metastatic niche during breast cancer.Clin Exp Metastasis2023
37202796Correction: Acetyl-CoA metabolism drives epigenome change and contributes to carcinogenesis risk in fatty liver disease.Genome Med2023
36914690Author Correction: Lipid exposure activates gene expression changes associated with estrogen receptor negative breast cancer.NPJ Breast Cancer2023
34048574The Axes of Life: A Roadmap for Understanding Dynamic Multiscale Systems.Integr Comp Biol2022
35739588Acetyl-CoA metabolism drives epigenome change and contributes to carcinogenesis risk in fatty liver disease.Genome Med2022
35508495Lipid exposure activates gene expression changes associated with estrogen receptor negative breast cancer.NPJ Breast Cancer2022
35398560Machine learning to design antimicrobial combination therapies: Promises and pitfalls.Drug Discov Today2022
36002598Single-cell RNA-sequencing identifies anti-cancer immune phenotypes in the early lung metastatic niche during breast cancer.Clin Exp Metastasis2022
36340881Protocol for CAROM: A machine learning tool to predict post-translational regulation from metabolic signatures.STAR Protoc2022
35898335Integrative analysis of clinical health records, imaging and pathogen genomics identifies personalized predictors of disease prognosis in tuberculosis.medRxiv2022
36378489TaxiBGC: a Taxonomy-Guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes.mSystems2022
36016709A flux-based machine learning model to simulate the impact of pathogen metabolic heterogeneity on drug interactions.PNAS Nexus2022
33881520Deep Learning for Reintegrating Biology.Integr Comp Biol2022
35072016Metabolic signatures of regulation by phosphorylation and acetylation.iScience2022
33945506The deacylase SIRT5 supports melanoma viability by influencing chromatin dynamics.J Clin Invest2021
33707554A multi-scale pipeline linking drug transcriptomics with pharmacokinetics predicts in vivo interactions of tuberculosis drugs.Sci Rep2021
34822450Metabolism, HDACs, and HDAC Inhibitors: A Systems Biology Perspective.Metabolites2021
34564422Next-Generation Genome-Scale Metabolic Modeling through Integration of Regulatory Mechanisms.Metabolites2021
34650276Metabolic remodelling during early mouse embryo development.Nat Metab2021
32411371Common biochemical properties of metabolic genes recurrently dysregulated in tumors.Cancer Metab2020
31908776Tissue of origin dictates GOT1 dependence and confers synthetic lethality to radiotherapy.Cancer Metab2020
31893379Inferring Metabolic Flux from Time-Course Metabolomics.Methods Mol Biol2020
33350385Individual differences in honey bee behavior enabled by plasticity in brain gene regulatory networks.Elife2020
32638413Nutrient Sensing by Histone Marks: Reading the Metabolic Histone Code Using Tracing, Omics, and Modeling.Bioessays2020
32937657Brain α-Tocopherol Concentration and Stereoisomer Profile Alter Hippocampal Gene Expression in Weanling Mice.J Nutr2020
32732914Purine metabolism regulates DNA repair and therapy resistance in glioblastoma.Nat Commun2020
32726628Dissecting Murine Muscle Stem Cell Aging through Regeneration Using Integrative Genomic Analysis.Cell Rep2020
30519950Predicting Drug Interactions From Chemogenomics Using INDIGO.Methods Mol Biol2019
31719182Transcriptomic Signatures Predict Regulators of Drug Synergy and Clinical Regimen Efficacy against Tuberculosis.mBio2019
29968347Cross-species systems analysis of evolutionary toolkits of neurogenomic response to social challenge.Genes Brain Behav2019
30094933Honey bee neurogenomic responses to affiliative and agonistic social interactions.Genes Brain Behav2019
31182013Dynamic genome-scale cell-specific metabolic models reveal novel inter-cellular and intra-cellular metabolic communications during ovarian follicle development.BMC Bioinformatics2019
31448363Tying Metabolic Branches With Histone Tails Using Systems Biology.Epigenet Insights2019
31062316Dynamic Network Modeling of Stem Cell Metabolism.Methods Mol Biol2019
30823893Genome-scale network model of metabolism and histone acetylation reveals metabolic dependencies of histone deacetylase inhibitors.Genome Biol2019
30788794A Protocol for the Construction and Curation of Genome-Scale Integrated Metabolic and Regulatory Network Models.Methods Mol Biol2019
30596642Chemogenomic model identifies synergistic drug combinations robust to the pathogen microenvironment.PLoS Comput Biol2018
28704398Temporal dynamics of neurogenomic plasticity in response to social interactions in male threespined sticklebacks.PLoS Genet2017
28356321Transcriptional regulatory dynamics drive coordinated metabolic and neural response to social challenge in mice.Genome Res2017
28328153Behavioral, transcriptomic and epigenetic responses to social challenge in honey bees.Genes Brain Behav2017
29107333Granzyme B Disrupts Central Metabolism and Protein Synthesis in Bacteria to Promote an Immune Cell Death Program.Cell2017
29212039Comprehensive Mapping of Pluripotent Stem Cell Metabolism Using Dynamic Genome-Scale Network Modeling.Cell Rep2017
26925214Structure and function of gene regulatory networks associated with worker sterility in honeybees.Ecol Evol2016
27320042LIN28 Regulates Stem Cell Metabolism and Conversion to Primed Pluripotency.Cell Stem Cell2016
27222539Chemogenomics and orthology-based design of antibiotic combination therapies.Mol Syst Biol2016
25640316Aggression is associated with aerobic glycolysis in the honey bee brain(1).Genes Brain Behav2015
25028489A system-level model for the microbial regulatory genome.Mol Syst Biol2014
23417801A guide to integrating transcriptional regulatory and metabolic networks using PROM (probabilistic regulation of metabolism).Methods Mol Biol2013
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Release 1.2