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Author Details

Andrew M Gross
Illumina Inc.
2011
17
14
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
30293986Copy-number variants in clinical genome sequencing: deployment and interpretation for rare and undiagnosed disease.Genet Med2019
30209081Multiple Routes to Oncogenesis Are Promoted by the Human Papillomavirus-Host Protein Network.Cancer Discov2018
28188128Interaction Landscape of Inherited Polymorphisms with Somatic Events in Cancer.Cancer Discov2017
28351423Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment.Genome Biol2017
27105112Methylome-wide Analysis of Chronic HIV Infection Reveals Five-Year Increase in Biological Age and Epigenetic Targeting of HLA.Mol Cell2016
27453043A Network of Conserved Synthetic Lethal Interactions for Exploration of Precision Cancer Therapy.Mol Cell2016
25735654Combined TP53 mutation/3p loss correlates with decreased radiosensitivity and increased matrix-metalloproteinase activity in head and neck carcinoma.Oral Oncol2015
26437225Chemogenetic profiling identifies RAD17 as synthetically lethal with checkpoint kinase inhibition.Oncotarget2015
26555223Analysis of Matched Tumor and Normal Profiles Reveals Common Transcriptional and Epigenetic Signals Shared across Cancer Types.PLoS One2015
26154012Molecular networks in context.Nat Biotechnol2015
26083491ERCC1 and TS Expression as Prognostic and Predictive Biomarkers in Metastatic Colon Cancer.PLoS One2015
25993138Towards a personalized treatment of head and neck cancer.Am Soc Clin Oncol Educ Book2015
25086664Multi-tiered genomic analysis of head and neck cancer ties TP53 mutation to 3p loss.Nat Genet2014
25091190Matrix-metalloproteinases in head and neck carcinoma-cancer genome atlas analysis and fluorescence imaging in mice.Otolaryngol Head Neck Surg2014
24037242Network-based stratification of tumor mutations.Nat Methods2013
22315425Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor.Proc Natl Acad Sci U S A2012
21625625Tensor decomposition reveals concurrent evolutionary convergences and divergences and correlations with structural motifs in ribosomal RNA.PLoS One2011
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Collaborators

Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 13
Jason F Kreisberg
University of California San Diego
Co-authored papers 5
John Paul Shen
The University of Texas MD Anderson Cancer Center
Co-authored papers 5
Hannah Carter
University of California San Diego
Co-authored papers 4
Scott M Lippman
Moores Cancer Center, university of california san diego
Co-authored papers 4
Ezra E W Cohen
university of california san diego Health System
Co-authored papers 3
Matan Hofree
Broad Institute of Harvard and MIT
Co-authored papers 3
Quyen T Nguyen
University of California San Diego
Co-authored papers 3
Ryan K Orosco
university of california san diego
Co-authored papers 3
Katherine Licon
University of California San Diego
Co-authored papers 3
Ana Bojorquez-Gomez
University of California
Co-authored papers 2
Su Ming Sun
Leiden University Medical Center
Co-authored papers 2
Jianfeng Li
Mitchell Cancer Institute, University of South Alabama
Co-authored papers 2
Kristin Klepper
University of California San Diego
Co-authored papers 2
Roger Y Tsien
University of California
Co-authored papers 2
Huwate Yeerna
Moores Cancer Center, University of California
Co-authored papers 2
Justin K Huang
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Michael A Whitney
University of California San Diego
Co-authored papers 2
Sharat Raju
University of Washington
Co-authored papers 2
Vignesh Sivaganesh
University of the Sciences
Co-authored papers 2
Robert W Sobol
University of South Alabama
Co-authored papers 2
Michel B Choueiri
University of California San Diego, United States of America Moores Cancer Center
Co-authored papers 2
Jennifer R Grandis
University of California san francisco
Co-authored papers 2
Elamprakash N Savariar
university of california san diego
Co-authored papers 2
Rohith Srivas
Amgen Inc.
Co-authored papers 2
Haico van Attikum
Leiden University Medical Center
Co-authored papers 2
Jia L Xu
Stem Cell Program and Institute for Genomic Medicine, University of California
Co-authored papers 2
Samantha J Hauff
University of California-San Diego
Co-authored papers 2
Daniel Pekin
University of California
Co-authored papers 2
James Jensen
University of California San Diego
Co-authored papers 2
Release 1.2