Author details

Full Name

Jeremy A Miller

Affiliation

ORCID

Career Start Year

2008

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37605362	Ferroptosis of Microglia in Aging Human White Matter Injury.	Ann Neurol	2023
34992294	Author Correction: Human neocortical expansion involves glutamatergic neuron diversification.	Nature	2022
35771910	Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH.	Science	2022
36577383	Multi-modal characterization and simulation of human epileptic circuitry.	Cell Rep	2022
34750582	Anatomical structures, cell types and biomarkers of the Human Reference Atlas.	Nat Cell Biol	2021
35356158	Consistent cross-modal identification of cortical neurons with coupled autoencoders.	Nat Comput Sci	2021
33796061	The Delayed Neuropathological Consequences of Traumatic Brain Injury in a Community-Based Sample.	Front Neurol	2021
33509999	Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems.	Science	2021
34088715	A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing.	Genome Res	2021
33249453	FR-Match: robust matching of cell type clusters from single cell RNA sequencing data using the Friedman-Rafsky non-parametric test.	Brief Bioinform	2021
34616067	Human neocortical expansion involves glutamatergic neuron diversification.	Nature	2021
34616062	Comparative cellular analysis of motor cortex in human, marmoset and mouse.	Nature	2021
34429496	Comprehensive in situ mapping of human cortical transcriptomic cell types.	Commun Biol	2021
32522880	Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain.	Proc Natl Acad Sci U S A	2020
32127543	Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons.	Nat Commun	2020
33372656	Common cell type nomenclature for the mammalian brain.	Elife	2020
30733664	A Microglial Signature Directing Human Aging and Neurodegeneration-Related Gene Networks.	Frontiers in Neuroscience	2019
31710287	Single-cell transcriptomic evidence for dense intracortical neuropeptide networks.	Elife	2019
31231419	An Inflammatory Landscape for Preoperative Neurologic Deficits in Glioblastoma.	Front Genet	2019
31435019	Conserved cell types with divergent features in human versus mouse cortex.	Nature	2019
29785013	Genetic identification of brain cell types underlying schizophrenia.	Nat Genet	2018
30392798	h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex.	Neuron	2018
30586455	Single-nucleus and single-cell transcriptomes compared in matched cortical cell types.	PLoS One	2018
30150662	Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type.	Nat Neurosci	2018
30382198	Shared and distinct transcriptomic cell types across neocortical areas.	Nature	2018
29748285	An anatomic transcriptional atlas of human glioblastoma.	Science	2018
29590361	Cell type discovery using single-cell transcriptomics: implications for ontological representation.	Hum Mol Genet	2018
28279351	Single-Cell Profiling of an InÂ Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.	Neuron	2017
29120328	Neuropathological and transcriptomic characteristics of the aged brain.	Elife	2017
29322913	Cell type discovery and representation in the era of high-content single cell phenotyping.	BMC Bioinformatics	2017
29144976	Single-Cell Profiling of an InÂ Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation.	Neuron	2017
27897007	PRODUCTION OF A PRELIMINARY QUALITY CONTROL PIPELINE FOR SINGLE NUCLEI RNA-SEQ AND ITS APPLICATION IN THE ANALYSIS OF CELL TYPE DIVERSITY OF POST-MORTEM HUMAN BRAIN NEOCORTEX.	Pac Symp Biocomput	2017
27409810	A comprehensive transcriptional map of primate brain development.	Nature	2016
26890679	Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons.	Nat Protoc	2016
24014670	Correlated gene expression and target specificity demonstrate excitatory projection neuron diversity.	Cereb Cortex	2015
25954031	Spatiotemporal dynamics of the postnatal developing primate brain transcriptome.	Hum Mol Genet	2015
26001565	Induction of a common microglia gene expression signature by aging and neurodegenerative conditions: a co-expression meta-analysis.	Acta neuropathologica communications	2015
26627310	JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse.	Neuron	2015
26571460	Canonical genetic signatures of the adult human brain.	Nat Neurosci	2015
24695229	Transcriptional landscape of the prenatal human brain.	Nature	2014
24411938	Aerobic glycolysis in the human brain is associated with development and neotenous gene expression.	Cell Metab	2014
24952961	A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.	Neuron	2014
24564186	Improving reliability and absolute quantification of human brain microarray data by filtering and scaling probes using RNA-Seq.	BMC Genomics	2014
23406646	Systems analysis of human brain gene expression: mechanisms for HIV-associated neurocognitive impairment and common pathways with Alzheimer's disease.	BMC Med Genomics	2013
23776628	RiboTag analysis of actively translated mRNAs in Sertoli and Leydig cells in vivo.	PLoS ONE	2013
24267886	Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism.	Cell	2013
24154525	Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates.	Development	2013
23705665	Genes and pathways underlying regional and cell type changes in Alzheimer's disease.	Genome Med	2013
22996553	An anatomically comprehensive atlas of the adult human brain transcriptome.	Nature	2012
21816037	Strategies for aggregating gene expression data: the collapseRows R function.	BMC Bioinformatics	2011