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Author Details

Enis Afgan
Johns Hopkins University
2010
22
13
PMIDPaper TitleJournal TitlePublished Year
33104194GalaxyCloudRunner: enhancing scalable computing for Galaxy.Bioinformatics2021
33583104Using Galaxy to Perform Large-Scale Interactive Data Analyses-An Update.Curr Protoc2021
31197310Cloud bursting galaxy: federated identity and access management.Bioinformatics2020
32585001Corrigendum: The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update.Nucleic Acids Res2020
32479607The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update.Nucleic Acids Res2020
34366521CloudLaunch: Discover and Deploy Cloud Applications.Future Gener Comput Syst2019
29790989The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update.Nucleic Acids Res2018
34386295Federated Galaxy: Biomedical Computing at the Frontier.IEEE Int Conf Cloud Comput2018
28854616Bio-Docklets: virtualization containers for single-step execution of NGS pipelines.Gigascience2017
27137889The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update.Nucleic Acids Res2016
34423340CloudBridge: a Simple Cross-Cloud Python Library.Proc XSEDE16 (2016)2016
26501966Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.PLoS One2015
24928211BioBlend.objects: metacomputing with Galaxy.Bioinformatics2014
25472764Community-driven development for computational biology at Sprints, Hackathons and Codefests.BMC Bioinformatics2014
25001293Dissemination of scientific software with Galaxy ToolShed.Genome Biol2014
23630176BioBlend: automating pipeline analyses within Galaxy and CloudMan.Bioinformatics2013
22700313Using cloud computing infrastructure with CloudBioLinux, CloudMan, and Galaxy.Curr Protoc Bioinformatics2012
33907528A reference model for deploying applications in virtualized environments.Concurr Comput2012
23181507CloudMan as a platform for tool, data, and analysis distribution.BMC Bioinformatics2012
21699709Dynamics of mitochondrial heteroplasmy in three families investigated via a repeatable re-sequencing study.Genome Biol2011
22068528Harnessing cloud computing with Galaxy Cloud.Nat Biotechnol2011
21210983Galaxy CloudMan: delivering cloud compute clusters.BMC Bioinformatics2010
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Collaborators

James Taylor
Johns Hopkins University
Co-authored papers 16
Anton Nekrutenko
The Pennsylvania State University, University Park
Co-authored papers 10
Jeremy Goecks
Oregon Health & Science University
Co-authored papers 6
Daniel Blankenberg
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Co-authored papers 6
Dave Clements
Johns Hopkins University
Co-authored papers 5
John Chilton
The Pennsylvania State University, University Park
Co-authored papers 4
Brad A Chapman
Harvard T.H. Chan School of Public Health
Co-authored papers 4
Clare Sloggett
University of Melbourne
Co-authored papers 3
Jennifer Hillman-Jackson
Co-authored papers 3
Eric S Rasche
Clinical Bioinformatics Group, Erasmus Medical Center
Co-authored papers 2
Marius van den Beek
Institut Curie, PSL Research University, CNRS UMR 5, INSERM U934
Co-authored papers 2
Steffen M??ller
Rostock University Medical Center
Co-authored papers 1
Roman Valls Guimera
University of Melbourne
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Konstantinos Krampis
Co-authored papers 1
Toshiaki Katayama
Database Center for Life Science
Co-authored papers 1
Peter J A Cock
James Hutton Institute
Co-authored papers 1
Jacqueline Y Quinn
Autodesk Inc.
Co-authored papers 1
Andreas Tille
Robert Koch-Institute
Co-authored papers 1
Nomi L Harris
Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University
Co-authored papers 1
Francesco Strozzi
Fondazione Parco Tecnologico Padano
Co-authored papers 1
Michael C Schatz
Johns Hopkins University
Co-authored papers 1
Eri Kibukawa
Co-authored papers 1
William Spooner
Eagle Genomics Ltd.
Co-authored papers 1
Sascha Steinbiss
Wellcome Sanger Institute
Co-authored papers 1
Pjotr Prins
Wageningen University & Research
Co-authored papers 1
Torsten Seemann
University of Melbourne
Co-authored papers 1
David R Powell
Biomedicine Discovery Institute, Monash University
Co-authored papers 1
Anthony J Travis
School of Biological Sciences University of Aberdeen Aberdeen UK.
Co-authored papers 1
Stian Soiland-Reyes
The University of Manchester
Co-authored papers 1
Raoul J P Bonnal
National Institute for Molecular Genetics "Romeo ed Enrica Invernizzi"
Co-authored papers 1
Release 1.2