Author details

Full Name

Sylvain Poux

Affiliation

carnegie mellon university

ORCID

Career Start Year

1996

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
33445429	Diverse Taxonomies for Diverse Chemistries: Enhanced Representation of Natural Product Metabolism in UniProtKB.	Metabolites	2021
32875947	Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.	Open Biol	2020
31688925	Enzyme annotation in UniProtKB using Rhea.	Bioinformatics	2020
32716361	A Coordinated Approach by Public Domain Bioinformatics Resources to Aid the Fight Against Alzheimer's Disease Through Expert Curation of Key Protein Targets.	J Alzheimers Dis	2020
30937429	An enhanced workflow for variant interpretation in UniProtKB/Swiss-Prot improves consistency and reuse in ClinVar.	Database (Oxford)	2019
30102703	Scaling up data curation using deep learning: An application to literature triage in genomic variation resources.	PLoS Comput Biol	2018
27812934	Best Practices in Manual Annotation with the Gene Ontology.	Methods Mol Biol	2017
28207819	The ins and outs of eukaryotic viruses: Knowledge base and ontology of a viral infection.	PLoS One	2017
29036270	On expert curation and scalability: UniProtKB/Swiss-Prot as a case study.	Bioinformatics	2017
28545254	Bacterial Virus Ontology; Coordinating across Databases.	Viruses	2017
26896845	The UniProtKB guide to the human proteome.	Database (Oxford)	2016
26519399	UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View.	Methods Mol Biol	2016
25348399	HAMAP in 2015: updates to the protein family classification and annotation system.	Nucleic Acids Res	2015
26215368	Representing virus-host interactions and other multi-organism processes in the Gene Ontology.	BMC Microbiol	2015
25957950	The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations.	Database (Oxford)	2015
24622611	Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data.	Database (Oxford)	2014
25233094	An integrated ontology resource to explore and study host-virus relationships.	PLoS One	2014
24848695	Genetic variations and diseases in UniProtKB/Swiss-Prot: the ins and outs of expert manual curation.	Hum Mutat	2014
23161678	Gene Ontology annotations and resources.	Nucleic Acids Res	2013
23193261	HAMAP in 2013, new developments in the protein family classification and annotation system.	Nucleic Acids Res	2013
22123736	The UniProt-GO Annotation database in 2011.	Nucleic Acids Res	2012
23230445	UniProtKB amid the turmoil of plant proteomics research.	Front Plant Sci	2012
22465017	The UniProtKB/Swiss-Prot Tox-Prot program: A central hub of integrated venom protein data.	Toxicon	2012
20157489	Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase.	Database (Oxford)	2009
14755292	The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.	Nat Biotechnol	2004
12723698	Assembly of Polycomb complexes and silencing mechanisms.	Genetica	2003
11973279	The Drosophila trithorax protein is a coactivator required to prevent re-establishment of polycomb silencing.	Development	2002
11092813	Recruitment of components of Polycomb Group chromatin complexes in Drosophila.	Development	2001
11581156	Establishment of Polycomb silencing requires a transient interaction between PC and ESC.	Genes Dev	2001
10757803	Structure of a polycomb response element and in vitro binding of polycomb group complexes containing GAGA factor.	Mol Cell Biol	2000
8887562	Hunchback-independent silencing of late Ubx enhancers by a Polycomb Group Response Element.	EMBO J	1996

1 - 32 of 32

John Harry Caufield

American Heart Association, American Society for Microbiology, International Society for Computational Biology, Lawrence Berkeley National Laboratory, University of California Los Angeles, University of Delaware, Virginia Commonwealth University

Career Start Year 2012

Number of shared co-authors 7

Gareth A Palidwor

Ottawa Hospital Research Institute

Career Start Year 2005

Number of shared co-authors 0

B??rang??re Lombard

Institut Curie, PSL Research University

Career Start Year 2005

Number of shared co-authors 0

Vera van Noort

Leiden University, Institute of Biology Leiden

Career Start Year 2003

Number of shared co-authors 1

Roland Krause

University of Luxembourg

Career Start Year 2002

Number of shared co-authors 7

Josep F Abril

University of Barcelona

Career Start Year 2000

Number of shared co-authors 8

Gerard Cagney

Conway Institute of Biomedical and Biomolecular Sciences, University College Dublin

Career Start Year 2000

Number of shared co-authors 1

Elia Stupka

Center for Omics Sciences, IRCCS San Raffaele Scientific Institute

Career Start Year 2000

Number of shared co-authors 7

Karsten Hokamp

Smurfit Institute of Genetics, Trinity College of Dublin

Career Start Year 1999

Number of shared co-authors 4

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 17

J Lynn Fink

The University of Queensland Diamantina Institute, The University of Queensland

Career Start Year 1997

Number of shared co-authors 2

Luis Sanchez-Pulido

MRC Institute of Genetics and Molecular Medicine at the University of Edinburgh

Career Start Year 1996

Number of shared co-authors 1

Georg Fuellen

Rostock University Medical Center

Career Start Year 1996

Number of shared co-authors 1

Ralf Zimmer

Ludwig-Maximilians-Universitat Munchen

Career Start Year 1995

Number of shared co-authors 1

Terence D Murphy

National Center for Biotechnology Information, National Institutes of Health

Career Start Year 1995

Number of shared co-authors 5

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 7

Edward M Marcotte

University of Texas

Career Start Year 1993

Number of shared co-authors 8

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 3

Ewan Birney

European Bioinformatics Institute

Career Start Year 1992

Number of shared co-authors 32

Tyra G Wolfsberg

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1992

Number of shared co-authors 0

Cathy H Wu

Georgetown University Medical Center

Career Start Year 1992

Number of shared co-authors 51

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 7

Chris P Ponting

The University of Edinburgh

Career Start Year 1989

Number of shared co-authors 9

Brian P Brunk

University of Pennsylvania

Career Start Year 1989

Number of shared co-authors 1

Michal Linial

Institute of Life Sciences, The Hebrew University of Jerusalem

Career Start Year 1986

Number of shared co-authors 14

Lincoln Stein

Ontario Institute for Cancer Research, University Avenue

Career Start Year 1986

Number of shared co-authors 33

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 35

Justin T Reese

Lawrence Berkeley National Laboratory

Career Start Year 1985

Number of shared co-authors 9

Martin Kuiper

Norwegian University of Science and Technology

Career Start Year 1983

Number of shared co-authors 25

Darren A Natale

Georgetown University Medical Center

Career Start Year 1982

Number of shared co-authors 52

row(s) 1 - 30 of 30

Alan Bridge

carnegie mellon university

Co-authored papers 15

Ioannis Xenarios

University of Lausanne

Co-authored papers 14

Lydie Bougueleret

carnegie mellon university

Co-authored papers 11

Maria Livia Famiglietti

Centre Medical Universitaire

Co-authored papers 9

Patrick Masson

carnegie mellon university

Co-authored papers 8

Chantal Hulo

carnegie mellon university

Co-authored papers 8

Lionel Breuza

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Co-authored papers 8

Andrea H Auchincloss

carnegie mellon university

Co-authored papers 8

Philippe Le Mercier

carnegie mellon university

Co-authored papers 8

Elisabeth Coudert

Centre Medical Universitaire

Co-authored papers 8

Anne Estreicher

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Co-authored papers 7

Michele Magrane

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 7

Emmanuel Boutet

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Co-authored papers 7

Nicole Redaschi

Co-authored papers 7

Edouard de Castro

Co-authored papers 7

Ivo Pedruzzi

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Co-authored papers 7

Damien Lieberherr

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Co-authored papers 6

Marc Feuermann

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Co-authored papers 6

Pascale Gaudet

University of Geneva

Co-authored papers 6

Kristian B Axelsen

Centre Medical Universitaire

Co-authored papers 6

Catherine Rivoire

carnegie mellon university

Co-authored papers 6

Vincenzo Pirrotta

Co-authored papers 6

Guillaume Keller

carnegie mellon university

Co-authored papers 5

Michael Tognolli

Centre Medical Universitaire

Co-authored papers 5

Florence Jungo

Centre Medical Universitaire

Co-authored papers 5

Michel Schneider

Centre Medical Universitaire

Co-authored papers 5

Bernd Roechert

Centre Medical Universitaire

Co-authored papers 5

Arnaud Gos

Centre Medical Universitaire

Co-authored papers 5

Jane Lomax

Wellcome Sanger Institute

Co-authored papers 4

Shyamala Sundaram

Centre Medical Universitaire

Co-authored papers 4

1 - 30

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