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Author Details

Jason E McDermott
Pacific Northwest National Laboratory
1993
121
36
PMIDPaper TitleJournal TitlePublished Year
36671522The Missing Pieces: The Role of Secretion Systems in <i>Campylobacter jejuni</i> Virulence.Biomolecules2023
37647397Human cerebrospinal fluid contains diverse lipoprotein subspecies enriched in proteins implicated in central nervous system health.Sci Adv2023
36789294Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding.Bioinform Adv2023
36671522The Missing Pieces: The Role of Secretion Systems in <i>Campylobacter jejuni</i> Virulence.Biomolecules2023
36849975Rapid remodeling of the soil lipidome in response to a drying-rewetting event.Microbiome2023
37647397Human cerebrospinal fluid contains diverse lipoprotein subspecies enriched in proteins implicated in central nervous system health.Sci Adv2023
36789294Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding.Bioinform Adv2023
36849975Rapid remodeling of the soil lipidome in response to a drying-rewetting event.Microbiome2023
36123347Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.Nat Commun2022
35896960Proteomic and phosphoproteomic measurements enhance ability to predict ex vivo drug response in AML.Clin Proteomics2022
36123347Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.Nat Commun2022
35896960Proteomic and phosphoproteomic measurements enhance ability to predict ex vivo drug response in AML.Clin Proteomics2022
34051754Hypergraph models of biological networks to identify genes critical to pathogenic viral response.BMC Bioinformatics2021
33703901leapR: An R Package for Multiomic Pathway Analysis.J Proteome Res2021
33638890Night shift schedule causes circadian dysregulation of DNA repair genes and elevated DNA damage in humans.J Pineal Res2021
34171263The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance.Cancer Cell2021
34119693Phosphoproteomic response of cardiac endothelial cells to ischemia and ultrasound.Biochim Biophys Acta Proteins Proteom2021
34113365New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in <i>Arabidopsis thaliana</i>.Front Plant Sci2021
34051754Hypergraph models of biological networks to identify genes critical to pathogenic viral response.BMC Bioinformatics2021
34446837Moisture modulates soil reservoirs of active DNA and RNA viruses.Commun Biol2021
34724822DNA Viral Diversity, Abundance, and Functional Potential Vary across Grassland Soils with a Range of Historical Moisture Regimes.mBio2021
34527795(Phospho)Proteomic dataset of ischemia- and ultrasound- stimulated mouse cardiac endothelial cells in vitro.Data Brief2021
33638890Night shift schedule causes circadian dysregulation of DNA repair genes and elevated DNA damage in humans.J Pineal Res2021
33703901leapR: An R Package for Multiomic Pathway Analysis.J Proteome Res2021
34527795(Phospho)Proteomic dataset of ischemia- and ultrasound- stimulated mouse cardiac endothelial cells in vitro.Data Brief2021
34724822DNA Viral Diversity, Abundance, and Functional Potential Vary across Grassland Soils with a Range of Historical Moisture Regimes.mBio2021
34446837Moisture modulates soil reservoirs of active DNA and RNA viruses.Commun Biol2021
34119693Phosphoproteomic response of cardiac endothelial cells to ischemia and ultrasound.Biochim Biophys Acta Proteins Proteom2021
34171263The AML microenvironment catalyzes a stepwise evolution to gilteritinib resistance.Cancer Cell2021
34113365New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in <i>Arabidopsis thaliana</i>.Front Plant Sci2021
32529193Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
32078632Ten Simple Rules to becoming a principal investigator.PLoS Comput Biol2020
32763940Terabase Metagenome Sequencing of Grassland Soil Microbiomes.Microbiol Resour Announc2020
32529193Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
32954372Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
32078632Ten Simple Rules to becoming a principal investigator.PLoS Comput Biol2020
32763940Terabase Metagenome Sequencing of Grassland Soil Microbiomes.Microbiol Resour Announc2020
32954372Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability.Cell Rep Med2020
31189691Phosphoproteome Analysis Reveals Estrogen-ER Pathway as a Modulator of mTOR Activity Via DEPTOR.Mol Cell Proteomics2019
31616667The Role of EGFR in Influenza Pathogenicity: Multiple Network-Based Approaches to Identify a Key Regulator of Non-lethal Infections.Front Cell Dev Biol2019
31527878Unified feature association networks through integration of transcriptomic and proteomic data.PLoS Comput Biol2019
31227600An Integrative Analysis of Tumor Proteomic and Phosphoproteomic Profiles to Examine the Relationships Between Kinase Activity and Phosphorylation.Mol Cell Proteomics2019
31189691Phosphoproteome Analysis Reveals Estrogen-ER Pathway as a Modulator of mTOR Activity Via DEPTOR.Mol Cell Proteomics2019
31616667The Role of EGFR in Influenza Pathogenicity: Multiple Network-Based Approaches to Identify a Key Regulator of Non-lethal Infections.Front Cell Dev Biol2019
31527878Unified feature association networks through integration of transcriptomic and proteomic data.PLoS Comput Biol2019
31227600An Integrative Analysis of Tumor Proteomic and Phosphoproteomic Profiles to Examine the Relationships Between Kinase Activity and Phosphorylation.Mol Cell Proteomics2019
29300733Ten simple rules for drawing scientific comics.PLoS Comput Biol2018
30314469Improving network inference algorithms using resampling methods.BMC Bioinformatics2018
30017829Proteogenomic Analysis of Surgically Resected Lung Adenocarcinoma.J Thorac Oncol2018
30006565Co-expression of CD39 and CD103 identifies tumor-reactive CD8 T cells in human solid tumors.Nat Commun2018
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Collaborators

Richard D Smith
Pacific Northwest National Laboratory
Co-authored papers 25
Joshua N Adkins
Co-authored papers 20
Katrina M Waters
Pacific Northwest National Laboratory
Co-authored papers 18
Karin D Rodland
Oregon Health and Science University
Co-authored papers 17
Ram Samudrala
Jacobs School of Medicine and Biomedical Sciences, University at Buffalo
Co-authored papers 15
Thomas O Metz
Pacific Northwest National Laboratory
Co-authored papers 15
Hugh D Mitchell
Pacific Northwest National Laboratory (PNNL)
Co-authored papers 14
Bobbie-Jo M Webb-Robertson
Pacific Northwest National Laboratory
Co-authored papers 11
Marina A Gritsenko
Pacific Northwest National Laboratory
Co-authored papers 11
Charles Ansong
Pacific Northwest National Laboratory
Co-authored papers 10
Michael G Katze
University of Washington
Co-authored papers 9
Melissa M Matzke
Pacific Northwest National Laboratory
Co-authored papers 9
Vladislav A Petyuk
Pacific Northwest National Laboratory
Co-authored papers 8
Bing Zhang
Baylor College of Medicine
Co-authored papers 8
Tao Liu
Pacific Northwest National Laboratory
Co-authored papers 8
Jon M Jacobs
Pacific Northwest National Laboratory
Co-authored papers 7
Anil K Shukla
Pacific Northwest National Laboratory
Co-authored papers 7
Samuel H Payne
Brigham Young University
Co-authored papers 7
Matthew E Monroe
Pacific Northwest National Laboratory
Co-authored papers 7
Joel G Pounds
Co-authored papers 7
Amie J Eisfeld
Influenza Research Institute, University of Wisconsin-Madison
Co-authored papers 6
Athena A Schepmoes
Pacific Northwest National Laboratory
Co-authored papers 6
Ralph S Baric
University of North Carolina
Co-authored papers 6
Therese R W Clauss
Pacific Northwest National Laboratory
Co-authored papers 6
Christopher C Overall
Co-authored papers 6
Osama A Arshad
Wellcome Sanger Institute
Co-authored papers 5
Jing Wang
Pacific Northwest National Laboratory
Co-authored papers 5
Zhen Zhang
Co-authored papers 5
Lisa M Bramer
Co-authored papers 5
Ernesto S Nakayasu
Co-authored papers 5
Release 1.2