Author details

Full Name

Pengyuan Yang

Affiliation

ORCID

Career Start Year

1996

Papers

503

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37431278	Click-iG: Simultaneous Enrichment and Profiling of Intact N-linked, O-GalNAc, and O-GlcNAcylated Glycopeptides.		2023
36508826	Particle size-dependent effects of silver nanoparticles on swim bladder damage in zebrafish larvae.		2023
34689996	Intratumoral stem-like CCR4+ regulatory T cells orchestrate the immunosuppressive microenvironment in HCC associated with hepatitis B.	Journal of Hepatology	2022
35462138	Shotgun lipidomics combined targeted MRM reveals sphingolipid signatures of coronary artery disease.	Talanta	2022
35671090	Comprehensive comparison of sample preparation workflows for proteomics.	Molecular Omics	2022
36477196	pGlycoQuant with a deep residual network for quantitative glycoproteomics at intact glycopeptide level.		2022
34928127	Ultrasensitive Trace Sample Proteomics Unraveled the Protein Remodeling during Mesenchymal-Amoeboid Transition.	Analytical Chemistry	2022
34978375	Circulating proteomic panels for risk stratification of intracranial aneurysm and its rupture.	EMBO Mol Med	2022
35235781	Proteome-centric cross-omics characterization and integrated network analyses of triple-negative breast cancer.	Cell Reports	2022
35218895	Establishment of an inducible cell line for Hepatitis B virus genotype C2 and its pharmacological responses to interferons.	Pharmacological Research	2022
34973552	Comprehensive mass spectrometry for development of proteomic biomarkers of intracranial aneurysms.	Talanta	2022
34893784	Author Correction: Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis.	Nat Methods	2022
35120739	Corrigendum to "Comprehensive mass spectrometry for development of proteomic biomarkers of intracranial aneurysms" [Talanta 240 (2021) 123159].	Talanta	2022
34808569	Rapid sample preparation workflow based on enzymatic nanoreactors for potential serum biomarker discovery in pancreatic cancer.	Talanta	2022
34361805	Computational and Mass Spectrometry-Based Approach Identify Deleterious Non-Synonymous Single Nucleotide Polymorphisms (nsSNPs) in JMJD6.	Molecules	2021
34290402	Enhancement of E-cadherin expression and processing and driving of cancer cell metastasis by ARID1A deficiency.	Oncogene	2021
33856767	Puromycin-Modified Silica Microsphere-Based Nascent Proteomics Method for Rapid and Deep Nascent Proteome Profile.	Analytical Chemistry	2021
33581334	OGP: A Repository of Experimentally Characterized O-glycoproteins to Facilitate Studies on O-glycosylation.		2021
34161081	Quantitative and Site-Specific Chemoproteomic Profiling of Protein O-GlcNAcylation in the Cell Cycle.	ACS Chemical Biology	2021
34110123	Afterglow Amplification for Fast and Sensitive Detection of Porphyria in Whole Blood.	ACS applied materials & interfaces	2021
34108657	Single-cell epigenomic landscape of peripheral immune cells reveals establishment of trained immunity in individuals convalescing from COVID-19.	Nature Cell Biology	2021
34002197	Microarray investigation of glycan remodeling during macrophage polarization reveals Î±2,6 sialic acid as an anti-inflammatory indicator.	Molecular Omics	2021
34199411	A Multi-Omics Study of Human Testis and Epididymis.	Molecules	2021
33877808	Effective Enrichment Strategy Using Boronic Acid-Functionalized Mesoporous Graphene-Silica Composites for Intact N- and O-Linked Glycopeptide Analysis in Human Serum.	Analytical Chemistry	2021
34137416	Metabolomics analysis provides new insights into the medicinal value of flavonoids in tobacco leaves.	Molecular Omics	2021
33981148	Increased Collagen Type V Î±2 (COL5A2) in Colorectal Cancer is Associated with Poor Prognosis and Tumor Progression.	OncoTargets and Therapy	2021
33653774	Hepatitis B-Induced IL8 Promotes Hepatocellular Carcinoma Venous Metastasis and Intrahepatic Treg Accumulation.	Cancer Research	2021
33556625	Recent Advances in Software Tools for More Generic and Precise Intact Glycopeptide Analysis.	Molecular and Cellular Proteomics	2021
34249867	Optimized MALDI-TOF MS Strategy for Characterizing Polymers.	Frontiers in Chemistry	2021
33372771	Rapid Sample Preparation Workflow for Serum Sample Analysis with Different Mass Spectrometry Acquisition Strategies.	Analytical Chemistry	2021
32920739	Quantitative proteomics reveals stage-specific protein regulation of triple negative breast cancer.	Breast Cancer Research and Treatment	2021
34395380	gQuant, an Automated Tool for Quantitative Glycomic Data Analysis.	Frontiers in Chemistry	2021
34725484	Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis.	Nat Methods	2021
34663801	GproDIA enables data-independent acquisition glycoproteomics with comprehensive statistical control.	Nature Communications	2021
34824474	Precise, fast and comprehensive analysis of intact glycopeptides and modified glycans with pGlyco3.	Nature Methods	2021
34484231	Precision N-Glycoproteomic Profiling of Murine Peritoneal Macrophages After Different Stimulations.	Frontiers in Immunology	2021
33218490	An ultrafast and highly efficient enrichment method for both N-Glycopeptides and N-Glycans by bacterial cellulose.	Analytica Chimica Acta	2020
31914820	Novel methods in glycomics: a 2019 update.	Expert Review of Proteomics	2020
31594582	Aperture-controllable nano-electrospray emitter and its application in cardiac proteome analysis.	Talanta	2020
32319474	Lipidomic profiling of virus infection identifies mediators that resolve herpes simplex virus-induced corneal inflammatory lesions.	Analyst	2020
32415480	SIRT5 is important for bacterial infection by regulating insulin secretion and glucose homeostasis.	Protein and Cell	2020
31775502	Outer Membrane Protease OmpT-Based Strategy for Simplified Analysis of Histone Post-Translational Modifications by Mass Spectrometry.	Analytical Chemistry	2020
32278046	CCL22 signaling contributes to sorafenib resistance in hepatitis B virus-associated hepatocellular carcinoma.	Pharmacological Research	2020
32275135	Development of a Computational Tool for Automated Interpretation of Intact -Glycopeptide Tandem Mass Spectra from Single Proteins.	Analytical Chemistry	2020
31919359	In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics.	Nature Communications	2020
32439051	Protein-protein correlations based variable dimension expansion algorithm for high efficient serum biomarker discovery.	Analytica Chimica Acta	2020
31751117	Multilayered N-Glycoproteome Profiling Reveals Highly Heterogeneous and Dysregulated Protein N-Glycosylation Related to Alzheimer's Disease.	Analytical Chemistry	2020
32601462	WD repeat-containing protein 1 maintains Î²-Catenin activity to promote pancreatic cancer aggressiveness.	British Journal of Cancer	2020
33372176	3D landscape of Hepatitis B virus interactions with human chromatins.	Cell Discovery	2020
32677633	Fast and precise quantification of serum biomarkers and simultaneous recognition of multiple diseases enabled by a stable isotope-labelled peptides assisted high-throughput MRM strategy.	Analyst, The	2020