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Author Details

Nicholas J W Rattray
Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde
2008
60
22
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36574699Distinct ecological fitness factors coordinated by a conserved <i>Escherichia coli</i> regulator during systemic bloodstream infection.Proc Natl Acad Sci U S A2023
37904959OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records.bioRxiv2023
37702489Urinary Paraben Concentrations and Associations with the Periconceptional Urinary Metabolome: Untargeted and Targeted Metabolomics Analyses of Participants from the Early Pregnancy Study.Environ Health Perspect2023
37580713Global serum profiling: an opportunity for earlier cancer detection.J Exp Clin Cancer Res2023
37408022Investigation of frailty markers including a novel biomarker panel in emergency laparotomy: protocol of a prospective cohort study.BMC Surg2023
34088787Untargeted Molecular Analysis of Exhaled Breath as a Diagnostic Test for Ventilator-Associated Lower Respiratory Tract Infections (BreathDx).Thorax2022
35765262Development of an Accessible Gene Expression Bioinformatics Pipeline to Study Driver Mutations of Colorectal Cancer.Altern Lab Anim2022
36422250An Optimised Monophasic Faecal Extraction Method for LC-MS Analysis and Its Application in Gastrointestinal Disease.Metabolites2022
36274154Bile acid distributions, sex-specificity, and prognosis in colorectal cancer.Biol Sex Differ2022
35954325The Differential Metabolic Signature of Breast Cancer Cellular Response to Olaparib Treatment.Cancers (Basel)2022
35948941Evaluation of the role of KPNA2 mutations in breast cancer prognosis using bioinformatics datasets.BMC Cancer2022
35977476Mitochondrial hyperfusion via metabolic sensing of regulatory amino acids.Cell Rep2022
34230210Kynurenic acid may underlie sex-specific immune responses to COVID-19.Sci Signal2021
33693819Identification of Dose-Dependent DNA Damage and Repair Responses From Subchronic Exposure to 1,4-Dioxane in Mice Using a Systems Analysis Approach.Toxicol Sci2021
34753981Breath and plasma metabolomics to assess inflammation in acute stroke.Sci Rep2021
34188068YIV-906 potentiated anti-PD1 action against hepatocellular carcinoma by enhancing adaptive and innate immunity in the tumor microenvironment.Sci Rep2021
34128837ENT2 facilitates brain endothelial cell penetration and blood-brain barrier transport by a tumor-targeting anti-DNA autoantibody.JCI Insight2021
32184446Sex Differences in Colon Cancer Metabolism Reveal A Novel Subphenotype.Sci Rep2020
32575361Tumor Tissue-Specific Biomarkers of Colorectal Cancer by Anatomic Location and Stage.Metabolites2020
30529449Identification and prospective stability of electronic nose (eNose)-derived inflammatory phenotypes in patients with severe asthma.J Allergy Clin Immunol2019
31690722Metabolic dysregulation in vitamin E and carnitine shuttle energy mechanisms associate with human frailty.Nat Commun2019
31546636Normalizing Untargeted Periconceptional Urinary Metabolomics Data: A Comparison of Approaches.Metabolites2019
30563328Machine Learning of Designed Translational Control Allows Predictive Pathway Optimization in Escherichia coli.ACS Synth Biol2019
29482659Yale School of Public Health Symposium on tissue imaging mass spectrometry: illuminating phenotypic heterogeneity and drug disposition at the molecular level.Hum Genomics2018
30271948An automated Design-Build-Test-Learn pipeline for enhanced microbial production of fine chemicals.Commun Biol2018
30272570Methodological considerations for large-scale breath analysis studies: lessons from the U-BIOPRED severe asthma project.J Breath Res2018
29750129Engineering the "Missing Link" in Biosynthetic (-)-Menthol Production: Bacterial Isopulegone Isomerase.ACS Catal2018
29374508Re-engineering and evaluation of anti-DNA autoantibody 3E10 for therapeutic applications.Biochem Biophys Res Commun2018
29373992Beyond genomics: understanding exposotypes through metabolomics.Hum Genomics2018
28049457BreathDx - molecular analysis of exhaled breath as a diagnostic test for ventilator-associated pneumonia: protocol for a European multicentre observational study.BMC Pulm Med2017
28485453Structural insights into the ene-reductase synthesis of profens.Org Biomol Chem2017
28448069Systems biology guided by XCMS Online metabolomics.Nat Methods2017
28144940Production of alkenes and novel secondary products by P450 OleT<sub>JE</sub> using novel H<sub>2</sub> O<sub>2</sub> -generating fusion protein systems.FEBS Lett2017
29093815Metabolomics guided pathway analysis reveals link between cancer metastasis, cholesterol sulfate, and phospholipids.Cancer Metab2017
28642837Environmental influences in the etiology of colorectal cancer: the premise of metabolomics.Curr Pharmacol Rep2017
26911805Meat, the metabolites: an integrated metabolite profiling and lipidomics approach for the detection of the adulteration of beef with pork.Analyst2016
26594136High-throughput metabolic screening of microalgae genetic variation in response to nutrient limitation.Metabolomics2016
26621574Metabolomic analysis of riboswitch containing E. coli recombinant expression system.Mol Biosyst2016
27604269Classification of Bacillus and Brevibacillus species using rapid analysis of lipids by mass spectrometry.Anal Bioanal Chem2016
27331395Metabolomics Analysis Reveals the Participation of Efflux Pumps and Ornithine in the Response of Pseudomonas putida DOT-T1E Cells to Challenge with Propranolol.PLoS One2016
27233359Intermittent energy restriction induces changes in breast gene expression and systemic metabolism.Breast Cancer Res2016
27440755FUM2, a Cytosolic Fumarase, Is Essential for Acclimation to Low Temperature in Arabidopsis thaliana.Plant Physiol2016
27284023SYNBIOCHEM-a SynBio foundry for the biosynthesis and sustainable production of fine and speciality chemicals.Biochem Soc Trans2016
27185383Bioinformatics for the synthetic biology of natural products: integrating across the Design-Build-Test cycle.Nat Prod Rep2016
27184092Electronic cigarette exposure triggers neutrophil inflammatory responses.Respir Res2016
27398079Metabolic analysis of the response of <i>Pseudomonas putida</i> DOT-T1E strains to toluene using Fourier transform infrared spectroscopy and gas chromatography mass spectrometry.Metabolomics2016
27153323Biochemical Analyses of Sorghum Varieties Reveal Differential Responses to Drought.PLoS One2016
26943791Towards Improving Point-of-Care Diagnosis of Non-malaria Febrile Illness: A Metabolomics Approach.PLoS Negl Trop Dis2016
25746987Metabolic Profiling of Geobacter sulfurreducens during Industrial Bioprocess Scale-Up.Appl Environ Microbiol2015
26659174Analytical medicine: Citizen scientists can aid diagnostics.Nature2015
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Collaborators

Royston Goodacre
Institute of Systems, University of Liverpool
Co-authored papers 25
Caroline H Johnson
Yale School of Public Health
Co-authored papers 17
Eriko Takano
Manchester Institute of Biotechnology, University of Manchester
Co-authored papers 6
Neil Swainston
Institute of Systems, University of Liverpool
Co-authored papers 5
Douglas B Kell
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Co-authored papers 3
Sally Freeman
Division of Pharmacy and Optometry, University of Manchester
Co-authored papers 3
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University of Manchester
Co-authored papers 2
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Amsterdam University Medical Centers
Co-authored papers 2
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Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 2
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St. James's Hospital
Co-authored papers 2
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Institute of Health Carlos III
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University of Manchester
Co-authored papers 2
Alan R Williams
The University of Manchester
Co-authored papers 2
Lieuwe D J Bos
Amsterdam University Medical Centers
Co-authored papers 2
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University of Lausanne
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University of Missouri
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University of Colorado School of Medicine
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Paul D Robbins
University of Minnesota
Co-authored papers 1
Judy D Wall
University of Missouri
Co-authored papers 1
Carolina Lucas
Yale School of Medicine
Co-authored papers 1
Adam J Moore
Yale School of Public Health
Co-authored papers 1
Casey M Theriot
College of Veterinary Medicine, North Carolina State University
Co-authored papers 1
Ivan Topisirovic
McGill University
Co-authored papers 1
Luke L Lairson
The Scripps Research Institute
Co-authored papers 1
Bertrand De Meulder
European Institute for Systems Biology and Medicine, CNRS-ENS-UCBL-INSERM
Co-authored papers 1
Aries Aisporna
Scripps Center for Metabolomics and Mass Spectrometry, The Scripps Research Institute
Co-authored papers 1
Michael W W Adams
University of Georgia
Co-authored papers 1
Marnix H Medema
Wageningen University
Co-authored papers 1
Anke H Maitland-van der Zee
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