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Author Details

Kirk Roberts
Georgia Institute of Technology, National Library of Medicine, University of Texas Health Science Center at Houston, University of Texas at Dallas
0000-0001-6525-5213
2011
84
18
PMIDPaper TitleJournal TitlePublished Year
36842490Discerning conversational context in online health communities for personalized digital behavior change solutions using Pragmatics to Reveal Intent in Social Media (PRISM) framework.J Biomed Inform2023
37479735The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era.NPJ Digit Med2023
37161566Logical definition-based identification of potential missing concepts in SNOMED CT.BMC Med Inform Decis Mak2023
37087111quEHRy: a question answering system to query electronic health records.J Am Med Inform Assoc2023
37096148Weakly supervised spatial relation extraction from radiology reports.JAMIA Open2023
37128406Toward a Neural Semantic Parsing System for EHR Question Answering.AMIA Annu Symp Proc2023
34739138Season and species influence stable isotope ratios between lethally and non-lethally sampled tissues in freshwater fish.J Fish Biol2022
35836130Toward a standard formal semantic representation of the model card report.BMC Bioinformatics2022
35702624Deep learning-based NLP data pipeline for EHR-scanned document information extraction.JAMIA Open2022
35795010Patient and Provider Perspectives on Medication Non-adherence Among Patients with Depression and/or Diabetes in Diverse Community Settings - A Qualitative Analysis.Patient Prefer Adherence2022
35482367Benefits of, Barriers to, and Needs for an Artificial Intelligence-Powered Medication Information Voice Chatbot for Older Adults: Interview Study With Geriatrics Experts.JMIR Aging2022
35146510Closing the loop: automatically identifying abnormal imaging results in scanned documents.J Am Med Inform Assoc2022
33387683Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review.J Biomed Inform2021
35371617Dental EHR-infused Persona Ontologies to Enrich Dental Dialogue Interaction of Agents.Proceedings (IEEE Int Conf Bioinformatics Biomed)2021
33711541Generalized and transferable patient language representation for phenotyping with limited data.J Biomed Inform2021
34457142Extracting Concepts for Precision Oncology from the Biomedical Literature.AMIA Jt Summits Transl Sci Proc2021
34457131Leveraging Spatial Information in Radiology Reports for Ischemic Stroke Phenotyping.AMIA Jt Summits Transl Sci Proc2021
34839119Fine-grained spatial information extraction in radiology as two-turn question answering.Int J Med Inform2021
34541586Patient-Provider Communication Training Models for Interactive Speech Devices.Digit Hum Model Appl Health Saf Ergon Risk Manag (2021)2021
34245913Searching for scientific evidence in a pandemic: An overview of TREC-COVID.J Biomed Inform2021
34071822Dramatic Increases in Telehealth-Related Tweets during the Early COVID-19 Pandemic: A Sentiment Analysis.Healthcare (Basel)2021
33936491Patient Cohort Retrieval using Transformer Language Models.AMIA Annu Symp Proc2021
33936406RadLex Normalization in Radiology Reports.AMIA Annu Symp Proc2021
33197268An evaluation of two commercial deep learning-based information retrieval systems for COVID-19 literature.J Am Med Inform Assoc2021
31058355Compliance with and ecosystem function of biodiversity offsets in North American and European freshwaters.Conserv Biol2020
34457376A health consumer ontology of fast food information.Proceedings (IEEE Int Conf Bioinformatics Biomed)2020
31794016Deep learning in clinical natural language processing: a methodical review.J Am Med Inform Assoc2020
33252345Social Media as a Research Tool (SMaaRT) for Risky Behavior Analytics: Methodological Review.JMIR Public Health Surveill2020
33336212A Hybrid Deep Learning Approach for Spatial Trigger Extraction from Radiology Reports.Proc Conf Empir Methods Nat Lang Process2020
33247935An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries.Database (Oxford)2020
33317519Conversational ontology operator: patient-centric vaccine dialogue management engine for spoken conversational agents.BMC Med Inform Decis Mak2020
33230366Towards an ontology-based medication conversational agent for PrEP and PEP.Proc Conf Assoc Comput Linguist Meet2020
33091829Automatic classification of scanned electronic health record documents.Int J Med Inform2020
33002137A content-based dataset recommendation system for researchers-a case study on Gene Expression Omnibus (GEO) repository.Database (Oxford)2020
32904141A dataset of chest X-ray reports annotated with Spatial Role Labeling annotations.Data Brief2020
32844163Rad-SpatialNet: A Frame-based Resource for Fine-Grained Spatial Relations in Radiology Reports.LREC Int Conf Lang Resour Eval2020
32477685Paraphrasing to improve the performance of Electronic Health Records Question Answering.AMIA Jt Summits Transl Sci Proc2020
32477682Patient Representation Transfer Learning from Clinical Notes based on Hierarchical Attention Network.AMIA Jt Summits Transl Sci Proc2020
32477680Developing a Search Engine for Precision Medicine.AMIA Jt Summits Transl Sci Proc2020
32477630Spatial Relation Extraction from Radiology Reports using Syntax-Aware Word Representations.AMIA Jt Summits Transl Sci Proc2020
32365190TREC-COVID: rationale and structure of an information retrieval shared task for COVID-19.J Am Med Inform Assoc2020
32308921Relation Extraction from Clinical Narratives Using Pre-trained Language Models.AMIA Annu Symp Proc2020
32308918Using FHIR to Construct a Corpus of Clinical Questions Annotated with Logical Forms and Answers.AMIA Annu Symp Proc2020
32151769A content-based literature recommendation system for datasets to improve data reusability - A case study on Gene Expression Omnibus (GEO) datasets.J Biomed Inform2020
32562898Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning.J Biomed Inform2020
32570495Addressing the Search Challenges of Precision Medicine with Information Retrieval Systems and Physician Readers.Stud Health Technol Inform2020
32253352Preparing a neurology department for SARS-CoV-2 (COVID-19): Early experiences at Columbia University Irving Medical Center and the New York Presbyterian Hospital in New York City.Neurology2020
30626250Telehealth Impact on Primary Care Related Ambulance Transports.Prehosp Emerg Care2019
34849512Overview of the TREC 2019 Precision Medicine Track.Text Retr Conf2019
31865902Conceiving an application ontology to model patient human papillomavirus vaccine counseling for dialogue management.BMC Bioinformatics2019
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Collaborators

Dina Demner-Fushman
Lister Hill National Center for Biomedical Communications
Co-authored papers 16
Yuqi Si
Shanghai Mental Health Center, Shanghai Jiao Tong University School of Medicine
Co-authored papers 11
Hua Xu
Yale University
Co-authored papers 9
Muhammad Amith
University of North Texas
Co-authored papers 9
Cui Tao
The University of Texas Health Science Center at Houston
Co-authored papers 8
Sanda M Harabagiu
Human Language Technology Research Institute, University of Texas at Dallas
Co-authored papers 7
William Hersh
Oregon Health & Science University
Co-authored papers 7
Steven Bedrick
Colorado College, Oregon Health & Science University, Oregon Health and Science University
Co-authored papers 6
Bryan Rink
The University of Texas at Dallas
Co-authored papers 5
Laritza Rodriguez
National Institutes of Health
Co-authored papers 5
Sonya E Shooshan
National Institutes of Health
Co-authored papers 5
Licong Cui
The University of Texas Health Science Center at Houston
Co-authored papers 5
Elmer V Bernstam
The University of Texas Health Science Center at Houston
Co-authored papers 5
Trevor Cohen
University of Washington (A.M.U., University of Washington (J.S.
Co-authored papers 4
Braja Gopal Patra
Cornell University
Co-authored papers 4
Halil Kilicoglu
University of Illinois Urbana-Champaign
Co-authored papers 4
Ellen M Voorhees
National Institute of Standards and Technology (Retired)
Co-authored papers 4
Yaoyun Zhang
The University of Texas School of Biomedical Informatics
Co-authored papers 4
Jingcheng Du
University of Texas Health Science Center at Houston
Co-authored papers 3
Rebecca Lin
Washington University School of Medicine
Co-authored papers 3
Nathan K Cobb
Georgetown University Medical Center
Co-authored papers 3
Tavleen Singh
The University of Texas Health Science Center
Co-authored papers 3
Meghana Gudala
University of Texas Health Science Center at Houston
Co-authored papers 3
Sahiti Myneni
University of Texas Health Science Center at Houston
Co-authored papers 3
Jingqi Wang
The University of Texas Health Science Center at Houston
Co-authored papers 3
Xiaoqian Jiang
Carnegie Mellon University, The University of Texas Health Science Center at Houston, University of California San Diego
Co-authored papers 3
Hulin Wu
School of Public Health, The University of Texas Health Science Center at Houston
Co-authored papers 3
Hee-Jin Lee
The University of Texas School of Biomedical Informatics
Co-authored papers 3
Ronald M Peshock
University of Texas Southwestern Medical Center
Co-authored papers 2
Mark Poesch
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Release 1.2