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Author Details

Daniel B Roche
Universita degli Studi di Milano - Computer Science Department - AnacletoLab
2010
28
17
PMIDPaper TitleJournal TitlePublished Year
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
28748648Accurate template-based modeling in CASP12 using the IntFOLD4-TS, ModFOLD6, and ReFOLD methods.Proteins2018
29017817Classification of β-hairpin repeat proteins.J Struct Biol2018
27965415Corrigendum: DisProt 7.0: a major update of the database of disordered proteins.Nucleic Acids Res2017
29258508Functional analysis of Plasmodium falciparum subpopulations associated with artemisinin resistance in Cambodia.Malar J2017
29206874Correction: Human babesiosis: Indication of a molecular mimicry between thrombospondin domains from a novel Babesia microti BmP53 protein and host platelets molecules.PLoS One2017
29040286Human babesiosis: Indication of a molecular mimicry between thrombospondin domains from a novel Babesia microti BmP53 protein and host platelets molecules.PLoS One2017
28850619The stability of Fbw7α in M-phase requires its phosphorylation by PKC.PLoS One2017
28685932Usage of a dataset of NMR resolved protein structures to test aggregation versus solubility prediction algorithms.Protein Sci2017
27899601DisProt 7.0: a major update of the database of disordered proteins.Nucleic Acids Res2017
27094282In silico Identification and Characterization of Protein-Ligand Binding Sites.Methods Mol Biol2016
26519323Toolbox for Protein Structure Prediction.Methods Mol Biol2016
27999363Neurotoxicity of a Biopesticide Analog on Zebrafish Larvae at Nanomolar Concentrations.Int J Mol Sci2016
25559918The enzymatic nature of an anonymous protein sequence cannot reliably be inferred from superfamily level structural information alone.Protein Sci2015
26434770An assessment of the amount of untapped fold level novelty in under-sampled areas of the tree of life.Sci Rep2015
26320412TAPO: A combined method for the identification of tandem repeats in protein structures.FEBS Lett2015
26694353Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods.Int J Mol Sci2015
25820431IntFOLD: an integrated server for modelling protein structures and functions from amino acid sequences.Nucleic Acids Res2015
24573476Assessing the quality of modelled 3D protein structures using the ModFOLD server.Methods Mol Biol2014
23761453The FunFOLD2 server for the prediction of protein-ligand interactions.Nucleic Acids Res2013
23620298The ModFOLD4 server for the quality assessment of 3D protein models.Nucleic Acids Res2013
22666491FunFOLDQA: a quality assessment tool for protein-ligand binding site residue predictions.PLoS One2012
22592378Improvement of 3D protein models using multiple templates guided by single-template model quality assessment.Bioinformatics2012
21459847The IntFOLD server: an integrated web resource for protein fold recognition, 3D model quality assessment, intrinsic disorder prediction, domain prediction and ligand binding site prediction.Nucleic Acids Res2011
22069035Automated tertiary structure prediction with accurate local model quality assessment using the IntFOLD-TS method.Proteins2011
21575183FunFOLD: an improved automated method for the prediction of ligand binding residues using 3D models of proteins.BMC Bioinformatics2011
19897565Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments.Bioinformatics2010
20861025The binding site distance test score: a robust method for the assessment of predicted protein binding sites.Bioinformatics2010
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Collaborators

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University of Reading
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University of Padova
Co-authored papers 4
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Institute of Nuclear Sciences Vinca, University of Belgrade
Co-authored papers 3
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University of Padova
Co-authored papers 3
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Heliant Ltd
Co-authored papers 3
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University of Padova
Co-authored papers 2
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University of Reading
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The Institute of Cancer Research
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Morsani College of Medicine, University of South Florida
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VIB-VUB Center for Structural Biology
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Federica Quaglia
University of Padova
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Naihui Zhou
The First Affiliated Hospital of Soochow University
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Magdalena Kotlicka-Antczak
Medical University of Lodz
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Alan J Medlar
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Rui Fa
University College London
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Sabeur Aridhi
Universite de Lorraine, CNRS
Co-authored papers 1
Qizhong Mao
Temple University
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Fabio Fabris
University of Kent
Co-authored papers 1
Wei-Cheng Tseng
Taipei Veterans General Hospital
Co-authored papers 1
Christophe Dessimoz
University of Lausanne
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Gage S Black
Brigham Young University
Co-authored papers 1
Suyang Dai
Fudan University
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