Author details

Full Name

Christopher J O Baker

Affiliation

University of New Brunswick

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

Mohammad Sadnan Al Manir (CM4AI)

PMID	Paper Title	Journal Title	Published Year
34804501	Perspectives on automated composition of workflows in the life sciences.	F1000Res	2021
32755893	Occupation Coding of Job Titles: Iterative Development of an Automated Coding Algorithm for the Canadian National Occupation Classification (ACA-NOC).	JMIR Form Res	2020
32604693	Semantic Web of Things (SWoT) for Global Infectious Disease Control and Prevention.	Stud Health Technol Inform	2020
29677912	Exploring Semantic Data Federation to Enable Malaria Surveillance Queries.	Stud Health Technol Inform	2018
29907554	A Surveillance Infrastructure for Malaria Analytics: Provisioning Data Access and Preservation of Interoperability.	JMIR Public Health Surveill	2018
28325883	Opinion: Why we need a centralized repository for isotopic data.	Proc Natl Acad Sci U S A	2017
26537131	From Cues to Nudge: A Knowledge-Based Framework for Surveillance of Healthcare-Associated Infections.	J Med Syst	2016
24568600	Benchmarking infrastructure for mutation text mining.	J Biomed Semantics	2014
24602174	The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.	J Biomed Semantics	2014
23497556	Semantic querying of relational data for clinical intelligence: a semantic web services-based approach.	J Biomed Semantics	2013
24013142	Classifying chemical mode of action using gene networks and machine learning: a case study with the herbicide linuron.	Comp Biochem Physiol Part D Genomics Proteomics	2013
23612187	The SADI Personal Health Lens: A Web Browser-Based System for Identifying Personally Relevant Drug Interactions.	JMIR Res Protoc	2013
32288895	HAIKU: A Semantic Framework for Surveillance of Healthcare-Associated Infections.	Procedia Comput Sci	2012
21442733	Toward a knowledge infrastructure for traits-based ecological risk assessment.	Integr Environ Assess Manag	2011
21992079	Deploying mutation impact text-mining software with the SADI Semantic Web Services framework.	BMC Bioinformatics	2011
22166494	Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.	J Biomed Semantics	2011
21828087	OrganismTagger: detection, normalization and grounding of organism entities in biomedical documents.	Bioinformatics	2011
21791100	Prototype semantic infrastructure for automated small molecule classification and annotation in lipidomics.	BMC Bioinformatics	2011
21893731	Knowledge-based surveillance for preventing postoperative surgical site infection.	Stud Health Technol Inform	2011
21143808	Algorithms and semantic infrastructure for mutation impact extraction and grounding.	BMC Genomics	2010
19758463	Between proteins and phenotypes: annotation and interpretation of mutations.	BMC Bioinformatics	2009
21347172	Mining to find the lipid interaction networks involved in Ovarian Cancers.	Summit Transl Bioinform	2009
18426544	The Second International Symposium on Languages in Biology and Medicine (LBM) 2007.	BMC Bioinformatics	2008
18524685	Ontology-centric integration and navigation of the dengue literature.	J Biomed Inform	2008
18315858	Towards ontology-driven navigation of the lipid bibliosphere.	BMC Bioinformatics	2008
18048198	Enhanced semantic access to the protein engineering literature using ontologies populated by text mining.	Int J Bioinform Res Appl	2007
18172931	A workflow for mutation extraction and structure annotation.	J Bioinform Comput Biol	2007
18172932	Towards a systematic evaluation of protein mutation extraction systems.	J Bioinform Comput Biol	2007
18335638	Making sense of mutation requires knowledge management.	J Bioinform Comput Biol	2007

1 - 29 of 29

Benjamin M Gyori

Khoury College of Computer Sciences, Northeastern University

Career Start Year 2014

Number of shared co-authors 2

Jerven Bolleman

carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4

Career Start Year 2013

Number of shared co-authors 9

Alejandro Rodr??guez-Gonz??lez

Centro de Tecnologia Biomedica. Universidad Politecnica de Madrid

Career Start Year 2012

Number of shared co-authors 2

Tudor Groza

Perth Children's Hospital

Career Start Year 2012

Number of shared co-authors 5

Jie Zheng

University of Pennsylvania Perelman School of Medicine

Career Start Year 2010

Number of shared co-authors 1

Simon Jupp

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2009

Number of shared co-authors 10

James Malone

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2009

Number of shared co-authors 11

Janna Hastings

Institute for Implementation Science in Health Care, University of Zurich

Career Start Year 2008

Number of shared co-authors 7

Helena F Deus

Elsevier Inc.

Career Start Year 2006

Number of shared co-authors 2

Larisa N Soldatova

University of London

Career Start Year 2005

Number of shared co-authors 3

Leyla Garcia

European Bioinformatics Institute

Career Start Year 2005

Number of shared co-authors 5

Karin Verspoor

National Centre for Infections in Cancer, 5Peter MacCallum Cancer Centre

Career Start Year 2005

Number of shared co-authors 4

Daniel Schober

Institute of Forensic Medicine, University of Bern

Career Start Year 2005

Number of shared co-authors 3

Benjamin M Good

Lawrence Berkeley National Laboratory

Career Start Year 2003

Number of shared co-authors 5

Alan Ruttenberg

University at Buffalo

Career Start Year 2003

Number of shared co-authors 2

Indra Neil Sarkar

Center for Biomedical Informatics, Brown University

Career Start Year 2001

Number of shared co-authors 0

M??lanie Courtot

Ontario Institute for Cancer Research

Career Start Year 2001

Number of shared co-authors 6

Georgios V Gkoutos

Institute of Cancer and Genomic Sciences, University of Birmingham

Career Start Year 2000

Number of shared co-authors 3

Marco Roos

Leiden University Medical Center

Career Start Year 1999

Number of shared co-authors 12

Karen Eilbeck

University of Utah

Career Start Year 1999

Number of shared co-authors 4

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Career Start Year 1998

Number of shared co-authors 12

Andra Waagmeester

Maastricht University

Career Start Year 1998

Number of shared co-authors 9

Yasunori Yamamoto

Database Center for Life Science, Joint Support-Center for Data Science Research

Career Start Year 1997

Number of shared co-authors 8

Victor Maojo

Universidad Politecnica de Madrid

Career Start Year 1997

Number of shared co-authors 2

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Career Start Year 1996

Number of shared co-authors 11

Lawrence E Hunter

University of Colorado School of Medicine

Career Start Year 1993

Number of shared co-authors 2

Patricia L Whetzel

University of Colorado Anschutz Medical Campus

Career Start Year 1993

Number of shared co-authors 10

Kei-Hoi Cheung

Yale University School of Medicine