|
| 36778473 | Higher alpha diversity and Lactobacillus blooms are associated with better engraftment after Fecal Microbiota Transplant in Inflammatory Bowel Disease. | medRxiv | 2023 |
| 37506208 | Lectin-Seq: A method to profile lectin-microbe interactions in native communities. | Sci Adv | 2023 |
| 36584425 | Contextualizing Wastewater-Based surveillance in the COVID-19 vaccination era. | Environ Int | 2023 |
| 34534872 | SARS-CoV-2 RNA concentrations in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases. | Sci Total Environ | 2022 |
| 35653470 | High-throughput, single-microbe genomics with strain resolution, applied to a human gut microbiome. | Science | 2022 |
| 35841797 | Rapid displacement of SARS-CoV-2 variant Delta by Omicron revealed by allele-specific PCR in wastewater. | Water Res | 2022 |
| 35605390 | Making waves: Wastewater surveillance of SARS-CoV-2 in an endemic future. | Water Res | 2022 |
| 36149894 | MicrobiomeCensus estimates human population sizes from wastewater samples based on inter-individual variability in gut microbiomes. | PLoS Comput Biol | 2022 |
| 36067855 | Wastewater to clinical case (WC) ratio of COVID-19 identifies insufficient clinical testing, onset of new variants of concern and population immunity in urban communities. | Sci Total Environ | 2022 |
| 35926021 | A conserved Bacteroidetes antigen induces anti-inflammatory intestinal T lymphocytes. | Science | 2022 |
| 36380771 | Nationwide Trends in COVID-19 Cases and SARS-CoV-2 RNA Wastewater Concentrations in the United States. | ACS ES T Water | 2022 |
| 36011319 | Maternal Microbiota Modulate a Fragile X-like Syndrome in Offspring Mice. | Genes (Basel) | 2022 |
| 36007397 | Monitoring human arboviral diseases through wastewater surveillance: Challenges, progress and future opportunities. | Water Res | 2022 |
| 35101695 | Metrics to relate COVID-19 wastewater data to clinical testing dynamics. | Water Res | 2022 |
| 35014601 | Effect of antibiotic pretreatment on bacterial engraftment after Fecal Microbiota Transplant (FMT) in IBS-D. | Gut Microbes | 2022 |
| 35217043 | Development of an efficient wastewater testing protocol for high-throughput country-wide SARS-CoV-2 monitoring. | Sci Total Environ | 2022 |
| 34995483 | Anatomy promotes neutral coexistence of strains in the human skin microbiome. | Cell Host Microbe | 2022 |
| 34490626 | Sustained Ability of a Natural Microbial Community to Remove Nitrate from Groundwater. | Ground Water | 2022 |
| 33349521 | The impact of gastrointestinal dysmotility on the aerodigestive microbiome of pediatric lung transplant recipients. | J Heart Lung Transplant | 2021 |
| 33794144 | Elevated rates of horizontal gene transfer in the industrialized human microbiome. | Cell | 2021 |
| 33488518 | Progressive Shifts in the Gut Microbiome Reflect Prediabetes and Diabetes Development in a Treatment-Naive Mexican Cohort. | Front Endocrinol (Lausanne) | 2021 |
| 33758888 | Wastewater Surveillance of SARS-CoV-2 across 40 U.S. states. | medRxiv | 2021 |
| 35005566 | Gut Ruminococcaceae levels at baseline correlate with risk of antibiotic-associated diarrhea. | iScience | 2021 |
| 34927170 | Wastewater network infrastructure in public health: Applications and learnings from the COVID-19 pandemic. | PLOS Glob Public Health | 2021 |
| 34402038 | "Waste Not, Want Not" - Leveraging Sewer Systems and Wastewater-Based Epidemiology for Drug Use Trends and Pharmaceutical Monitoring. | J Med Toxicol | 2021 |
| 34159339 | Metrics to relate COVID-19 wastewater data to clinical testing dynamics. | medRxiv | 2021 |
| 34274898 | Wastewater surveillance of SARS-CoV-2 across 40 U.S. states from February to June 2020. | Water Res | 2021 |
| 34184913 | Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance. | mSystems | 2021 |
| 34238227 | Daily, oral FMT for long-term maintenance therapy in ulcerative colitis: results of a single-center, prospective, randomized pilot study. | BMC Gastroenterol | 2021 |
| 34362925 | An omics-based framework for assessing the health risk of antimicrobial resistance genes. | Nat Commun | 2021 |
| 34288919 | Functional heterogeneity in the fermentation capabilities of the healthy human gut microbiota. | PLoS One | 2021 |
| 34281401 | Dynamic Colonization of Microbes and Their Functions after Fecal Microbiota Transplantation for Inflammatory Bowel Disease. | mBio | 2021 |
| 32252814 | Small and mighty: adaptation of superphylum Patescibacteria to groundwater environment drives their genome simplicity. | Microbiome | 2020 |
| 32046455 | The Vaginal Microbiome as a Tool to Predict rASRM Stage of Disease in Endometriosis: a Pilot Study. | Reprod Sci | 2020 |
| 33077825 | Predicting human health from biofluid-based metabolomics using machine learning. | Sci Rep | 2020 |
| 33391234 | Culturing of "Unculturable" Subsurface Microbes: Natural Organic Carbon Source Fuels the Growth of Diverse and Distinct Bacteria From Groundwater. | Front Microbiol | 2020 |
| 32607521 | SARS-CoV-2 titers in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases. | medRxiv | 2020 |
| 32598361 | Longitudinal wastewater sampling in buildings reveals temporal dynamics of metabolites. | PLoS Comput Biol | 2020 |
| 32707307 | Making waves: Wastewater surveillance of SARS-CoV-2 for population-based health management. | Water Res | 2020 |
| 32900799 | Prebiotics and Community Composition Influence Gas Production of the Human Gut Microbiota. | mBio | 2020 |
| 32645351 | Co-evolution and Co-speciation of Host-Gut Bacteria Systems. | Cell Host Microbe | 2020 |
| 32694130 | SARS-CoV-2 Titers in Wastewater Are Higher than Expected from Clinically Confirmed Cases. | mSystems | 2020 |
| 32530639 | Wastewater-Based Epidemiology: Global Collaborative to Maximize Contributions in the Fight Against COVID-19. | Environ Sci Technol | 2020 |
| 32329652 | 16S rRNA sequencing analysis: the devil is in the details. | Gut Microbes | 2020 |
| 32514119 | Genome and sequence determinants governing the expression of horizontally acquired DNA in bacteria. | ISME J | 2020 |
| 30373468 | Analysis of 1135 gut metagenomes identifies sex-specific resistome profiles. | Gut Microbes | 2019 |
| 31830054 | Comprehensive analysis of chromosomal mobile genetic elements in the gut microbiome reveals phylum-level niche-adaptive gene pools. | PLoS One | 2019 |
| 31600222 | Framework for rational donor selection in fecal microbiota transplant clinical trials. | PLoS One | 2019 |
| 31399723 | Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. | Nat Biotechnol | 2019 |
| 31341288 | Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. | Nat Biotechnol | 2019 |