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Author Details

Christopher Benner
Michigan State University College of Human Medicine
2004
138
62
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36758547Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients.Cell Rep Med2023
37214860A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats.bioRxiv2023
37403796Combining TSS-MPRA and sensitive TSS profile dissimilarity scoring to study the sequence determinants of transcription initiation.Nucleic Acids Res2023
36581509An epidural brain abscess and thrombus in the superior sagittal sinus in a 12 year-old with sinusitis.Am J Emerg Med2023
37333238Activation of the TRIF pathway and downstream targets results in the development of precancerous lesions during infection with <i>Helicobacter</i>.bioRxiv2023
37327971Strain and sex-related behavioral variability of oxycodone dependence in rats.Neuropharmacology2023
36758547Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients.Cell Rep Med2023
36689475Yeast derlin Dfm1 employs a chaperone-like function to resolve misfolded membrane protein stress.PLoS Biol2023
37425792Breakthrough infections by SARS-CoV-2 variants boost cross-reactive hybrid immune responses in mRNA-vaccinated Golden Syrian Hamsters.bioRxiv2023
37164785Bottle mix-up: Ethanol intoxication in an infant.Am J Emerg Med2023
36788858Endovascular Embolization of a Perforated Deep Femoral Artery in a 15-Year-Old Boy.Cureus2023
36720308Oral arsenic administration to humanizedUDP-glucuronosyltransferase1 neonatal mice induces UGT1A1 through a dependence on Nrf2 and PXR.J Biol Chem2023
37425792Breakthrough infections by SARS-CoV-2 variants boost cross-reactive hybrid immune responses in mRNA-vaccinated Golden Syrian Hamsters.bioRxiv2023
37214860A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats.bioRxiv2023
37403796Combining TSS-MPRA and sensitive TSS profile dissimilarity scoring to study the sequence determinants of transcription initiation.Nucleic Acids Res2023
37333238Activation of the TRIF pathway and downstream targets results in the development of precancerous lesions during infection with <i>Helicobacter</i>.bioRxiv2023
37164785Bottle mix-up: Ethanol intoxication in an infant.Am J Emerg Med2023
37327971Strain and sex-related behavioral variability of oxycodone dependence in rats.Neuropharmacology2023
36788858Endovascular Embolization of a Perforated Deep Femoral Artery in a 15-Year-Old Boy.Cureus2023
36720308Oral arsenic administration to humanizedUDP-glucuronosyltransferase1 neonatal mice induces UGT1A1 through a dependence on Nrf2 and PXR.J Biol Chem2023
36581509An epidural brain abscess and thrombus in the superior sagittal sinus in a 12 year-old with sinusitis.Am J Emerg Med2023
36689475Yeast derlin Dfm1 employs a chaperone-like function to resolve misfolded membrane protein stress.PLoS Biol2023
32658115Comparison of Computed Tomography Use and Mortality in Severe Pediatric Blunt Trauma at Pediatric Level I Trauma Centers Versus Adult Level 1 and 2 or Pediatric Level 2 Trauma Centers.Pediatr Emerg Care2022
35651629Glucocorticoid Receptor-Regulated Enhancers Play a Central Role in the Gene Regulatory Networks Underlying Drug Addiction.Front Neurosci2022
36097162SREBP2-dependent lipid gene transcription enhances the infection of human dendritic cells by Zika virus.Nat Commun2022
35835656Corrigendum to "Thoracic spinal arteriovenous malformation in a 16-year-old presenting with headache" [Am J Emerg Med. 2022 Jun;56:396.e5-396.e8. Epub 2022 Apr 1].Am J Emerg Med2022
35752626Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing.Nat Commun2022
35437201Thoracic spinal arteriovenous malformation in a 16-year-old presenting with headache.Am J Emerg Med2022
36337791Classic Presentation of Catecholaminergic Polymorphic Ventricular Tachycardia: A Case Report.Cureus2022
36075901Author Correction: Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing.Nat Commun2022
36267125MEPP: more transparent motif enrichment by profiling positional correlations.NAR Genom Bioinform2022
35981887Mitotic H3K9ac is controlled by phase-specific activity of HDAC2, HDAC3, and SIRT1.Life Sci Alliance2022
36817700Human-gained heart enhancers are associated with species-specific cardiac attributes.Nat Cardiovasc Res2022
36601187Ovarian Torsion and Its Remediation in a Three-Year-Old Girl.Cureus2022
32658115Comparison of Computed Tomography Use and Mortality in Severe Pediatric Blunt Trauma at Pediatric Level I Trauma Centers Versus Adult Level 1 and 2 or Pediatric Level 2 Trauma Centers.Pediatr Emerg Care2022
35076277Decoding Transcription Regulatory Mechanisms Associated with <i>Coccidioides immitis</i> Phase Transition Using Total RNA.mSystems2022
35651629Glucocorticoid Receptor-Regulated Enhancers Play a Central Role in the Gene Regulatory Networks Underlying Drug Addiction.Front Neurosci2022
35835656Corrigendum to "Thoracic spinal arteriovenous malformation in a 16-year-old presenting with headache" [Am J Emerg Med. 2022 Jun;56:396.e5-396.e8. Epub 2022 Apr 1].Am J Emerg Med2022
35437201Thoracic spinal arteriovenous malformation in a 16-year-old presenting with headache.Am J Emerg Med2022
35752626Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing.Nat Commun2022
36817700Human-gained heart enhancers are associated with species-specific cardiac attributes.Nat Cardiovasc Res2022
36601187Ovarian Torsion and Its Remediation in a Three-Year-Old Girl.Cureus2022
36075901Author Correction: Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing.Nat Commun2022
36337791Classic Presentation of Catecholaminergic Polymorphic Ventricular Tachycardia: A Case Report.Cureus2022
36267125MEPP: more transparent motif enrichment by profiling positional correlations.NAR Genom Bioinform2022
36097162SREBP2-dependent lipid gene transcription enhances the infection of human dendritic cells by Zika virus.Nat Commun2022
35981887Mitotic H3K9ac is controlled by phase-specific activity of HDAC2, HDAC3, and SIRT1.Life Sci Alliance2022
35076277Decoding Transcription Regulatory Mechanisms Associated with <i>Coccidioides immitis</i> Phase Transition Using Total RNA.mSystems2022
33232305Shear stress associated with cardiopulmonary bypass induces expression of inflammatory cytokines and necroptosis in monocytes.JCI Insight2021
33970190DNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells.J Exp Med2021
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Collaborators

Christopher K Glass
University of California San Diego
Co-authored papers 38
Sven Heinz
U.C. San Diego School of Medicine
Co-authored papers 29
Sascha H Duttke
College of Veterinary Medicine, Washington State University
Co-authored papers 19
Max W Chang
University of California San Diego
Co-authored papers 18
Adolfo Garc??a-Sastre
Icahn School of Medicine at Mount Sinai
Co-authored papers 13
Juan Carlos Izpisua Belmonte
Inc., Salk Institute for Biological Studies
Co-authored papers 10
Sumit K Chanda
The Scripps Research Institute
Co-authored papers 9
Michael G Rosenfeld
University of California San Diego
Co-authored papers 8
Lars Pache
Sanford Burnham Prebys Medical Discovery Institute
Co-authored papers 8
Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 7
Ronald M Evans
Co-authored papers 7
Cornelis Murre
University of California
Co-authored papers 7
Randy A Albrecht
Icahn School of Medicine at Mount Sinai
Co-authored papers 6
Minna U Kaikkonen
Co-authored papers 6
Ivan Garcia-Bassets
Co-authored papers 6
Laura Martin-Sancho
The Scripps Research Institute
Co-authored papers 6
Ivan Marazzi
Center for Epigenetics and Metabolism, University of California irvine
Co-authored papers 6
Paul D De Jesus
Sanford Burnham Prebys Medical Discovery Institute
Co-authored papers 6
Xiang-Dong Fu
Co-authored papers 5
David A Brenner
Co-authored papers 5
Michael Downes
Howard Hughes Medical Institute, Salk Institute for Biological Studies
Co-authored papers 5
Tatiana Kisseleva
Co-authored papers 5
Shankar Subramaniam
University of California
Co-authored papers 5
Sonya E Neal
University of California San Diego, United States Howard Hughes Medical Institute
Co-authored papers 5
Yin C Lin
Baylor Institute for Immunology Research
Co-authored papers 5
Nathanael J Spann
Co-authored papers 5
Joshua D Stender
University of California San Diego
Co-authored papers 5
Sara Brin Rosenthal
Center for Computational Biology and Bioinformatics, University of California
Co-authored papers 5
Kris M White
Quantitative Biosciences Institute (QBI) Coronavirus Research Group (QCRG)
Co-authored papers 5
Pieter C Dorrestein
Co-authored papers 4
Release 1.2