Skip to Main Content

Author Details

Sascha H Duttke
College of Veterinary Medicine, Washington State University
2012
36
16
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36758547Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients.Cell Rep Med2023
37403796Combining TSS-MPRA and sensitive TSS profile dissimilarity scoring to study the sequence determinants of transcription initiation.Nucleic Acids Res2023
37398300A single DPE core promoter motif contributes to <i>in vivo</i> transcriptional regulation and affects cardiac function.bioRxiv2023
36689475Yeast derlin Dfm1 employs a chaperone-like function to resolve misfolded membrane protein stress.PLoS Biol2023
35076277Decoding Transcription Regulatory Mechanisms Associated with <i>Coccidioides immitis</i> Phase Transition Using Total RNA.mSystems2022
35651629Glucocorticoid Receptor-Regulated Enhancers Play a Central Role in the Gene Regulatory Networks Underlying Drug Addiction.Front Neurosci2022
36267125MEPP: more transparent motif enrichment by profiling positional correlations.NAR Genom Bioinform2022
36097162SREBP2-dependent lipid gene transcription enhances the infection of human dendritic cells by Zika virus.Nat Commun2022
36012847Coccidioides Species: A Review of Basic Research: 2022.J Fungi (Basel)2022
34083448MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO.Science2021
33566711Inner-nuclear-membrane-associated degradation employs Dfm1-independent retrotranslocation and alleviates misfolded transmembrane-protein toxicity.Mol Biol Cell2021
34462742Profiling Transcription Initiation in Peripheral Leukocytes Reveals Severity-Associated Cis-Regulatory Elements in Critical COVID-19.bioRxiv2021
33970190DNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells.J Exp Med2021
34268494A Chinese hamster transcription start site atlas that enables targeted editing of CHO cells.NAR Genom Bioinform2021
30679424Diverse motif ensembles specify non-redundant DNA binding activities of AP-1 family members in macrophages.Nat Commun2019
31649059Identification and dynamic quantification of regulatory elements using total RNA.Genome Res2019
30910017Assays for protein retrotranslocation in ERAD.Methods Enzymol2019
30459264The Role of Auxin in the Pattern Formation of the Asteraceae Flower Head (Capitulum).Plant Physiol2019
29351849The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins.Mol Cell2018
29779944Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function.Cell2018
29499140The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins.Mol Cell2018
29379150RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis.Nat Plants2018
28963538Mutant p53 shapes the enhancer landscape of cancer cells in response to chronic immune signaling.Nat Commun2017
28108474The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters.Genes Dev2017
2780161312th Conference on Transcription and Chromatin - August 27-30, 2016 - Heidelberg, Germany.Epigenetics2016
27729530Nascent RNA sequencing reveals distinct features in plant transcription.Proc Natl Acad Sci U S A2016
25639469Human promoters are intrinsically directional.Mol Cell2015
26545075Perspectives on Unidirectional versus Divergent Transcription.Mol Cell2015
25661246Evolution and diversification of the basal transcription machinery.Trends Biochem Sci2015
24958592TRF2, but not TBP, mediates the transcription of ribosomal protein genes.Genes Dev2014
25437046Meeting report: 11th EMBL conference on transcription and chromatin - August 23-26, 2014 - Heidelberg, Germany.Epigenetics2014
25274724TRF2 and the evolution of the bilateria.Genes Dev2014
24917680RNA polymerase III accurately initiates transcription from RNA polymerase II promoters in vitro.J Biol Chem2014
22070353Developmental plasticity, morphological variation and evolvability: a multilevel analysis of morphometric integration in the shape of compound leaves.J Evol Biol2012
22301129Mutant flower morphologies in the wind orchid, a novel orchid model species.Plant Physiol2012
22965005Report on the 10th EMBL conference on transcription and chromatin: August 25-28, 2012 EMBL advanced training centre, Heidelberg, Germany.Epigenetics2012
  • 1 - 36 of 36

Recommended Authors

University of Copenhagen
Career Start Year 2014
Number of shared co-authors 0
Research Institute of Molecular Pathology (IMP)
Career Start Year 2012
Number of shared co-authors 0
Hospital of Obstetrics and Gynecology, Fudan University
Career Start Year 2011
Number of shared co-authors 0
University of Oslo
Career Start Year 2010
Number of shared co-authors 0
Center for Cell Analysis and Modeling, University of Connecticut
Career Start Year 2010
Number of shared co-authors 0
MRC London Institute of Medical Sciences
Career Start Year 2009
Number of shared co-authors 1
Universite de Toulon, CNRS
Career Start Year 2009
Number of shared co-authors 5
University of California San Diego san francisco
Career Start Year 2008
Number of shared co-authors 1
University of Copenhagen
Career Start Year 2007
Number of shared co-authors 0
Genome Institute of Singapore (GIS)
Career Start Year 2004
Number of shared co-authors 0
University of Cincinnati College of Medicine
Career Start Year 2003
Number of shared co-authors 9
Folkhalsan Research Center
Career Start Year 2003
Number of shared co-authors 1
Massachusetts Institute of Technology
Career Start Year 2003
Number of shared co-authors 5
University of Copenhagen
Career Start Year 2002
Number of shared co-authors 2
International Institute of Molecular and Cell Biology in Warsaw
Career Start Year 2002
Number of shared co-authors 1
Jacobs School of Medicine and Biomedical Sciences, University at Buffalo
Career Start Year 2002
Number of shared co-authors 0
Okinawa Institute of Science and Technology
Career Start Year 2001
Number of shared co-authors 0
Cancer Research UK Cambridge Institute, University of Cambridge
Career Start Year 1999
Number of shared co-authors 2
MRC London Institute of Medical Sciences
Career Start Year 1996
Number of shared co-authors 2
Institut de recherches cliniques de Montreal
Career Start Year 1996
Number of shared co-authors 2
Indian Institute of Technology Bombay
Career Start Year 1995
Number of shared co-authors 2
Radboud Institute for Molecular Science, Radboud University
Career Start Year 1995
Number of shared co-authors 0
University of Toronto
Career Start Year 1992
Number of shared co-authors 3
Center for Personal Dynamic Regulomes, Stanford University
Career Start Year 1992
Number of shared co-authors 1
RIKEN Center for Integrative Medical Sciences
Career Start Year 1990
Number of shared co-authors 4
Princess Maxima Center for Pediatric Oncology
Career Start Year 1990
Number of shared co-authors 1
Howard Hughes Medical Institute, University of California Berkeley
Career Start Year 1988
Number of shared co-authors 2
Broad Institute of MIT and Harvard
Career Start Year 1987
Number of shared co-authors 4
RIKEN Center for Integrative Medical Sciences
Career Start Year 1984
Number of shared co-authors 1
HHMI/NYU Langone School of Medicine
Career Start Year 1980
Number of shared co-authors 0

Collaborators

Michigan State University College of Human Medicine
Co-authored papers 19
University of California San Diego
Co-authored papers 8
University of California San Diego, United States Howard Hughes Medical Institute
Co-authored papers 6
U.C. San Diego School of Medicine
Co-authored papers 5
University of California
Co-authored papers 5
University of California San Diego
Co-authored papers 4
University of California San Diego
Co-authored papers 4
Co-authored papers 3
University of California
Co-authored papers 2
Co-authored papers 2
University of California
Co-authored papers 2
University of California San Diego
Co-authored papers 2
The Salk Institute for Biological Studies
Co-authored papers 2
University of California
Co-authored papers 2
Humboldt University
Co-authored papers 2
The University of North Carolina at Chapel Hill
Co-authored papers 2
McMaster University & St. Joseph's Healthcare Hamilton
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
Stowers Institute for Medical Research, University of Kansas School of Medicine
Co-authored papers 1
Co-authored papers 1
UPMC Hillman Cancer Center, University of Pittsburgh Medical Center
Co-authored papers 1
University of California-Riverside
Co-authored papers 1
University of California San Diego
Co-authored papers 1
University of California San Diego
Co-authored papers 1
University of San Diego
Co-authored papers 1
Center for Epigenomics, University of California San Diego
Co-authored papers 1
Co-authored papers 1
Icahn School of Medicine at Mount Sinai, Duke-NUS Medical School
Co-authored papers 1
Co-authored papers 1