Author details

Full Name

Jonas Ibn-Salem

Affiliation

Max-Planck Institute for Molecular Genetics, Johannes Gutenberg University of Mainz

ORCID

Career Start Year

2014

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35379963	Accurate detection of tumor-specific gene fusions reveals strongly immunogenic personal neo-antigens.	Nat Biotechnol	2022
31816285	The developmental transcriptome for Lytechinus variegatus exhibits temporally punctuated gene expression changes.	Dev Biol	2020
31323892	Computational Processing and Quality Control of Hi-C, Capture Hi-C and Capture-C Data.	Genes (Basel)	2019
31805995	The distributions of protein coding genes within chromatin domains in relation to human disease.	Epigenetics Chromatin	2019
31653198	7C:Â Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs.	BMC Genomics	2019
30086749	Evolutionary stability of topologically associating domains is associated with conserved gene regulation.	BMC Biol	2018
27634932	Co-regulation of paralog genes in the three-dimensional chromatin architecture.	Nucleic Acids Res	2017
28735859	Computational Prediction of Position Effects of Apparently Balanced Human Chromosomal Rearrangements.	Am J Hum Genet	2017
26755701	RNA-Seq identifies SPGs as a ventral skeletal patterning cue in sea urchins.	Development	2016
27814676	Q-nexus: a comprehensive and efficient analysis pipeline designed for ChIP-nexus.	BMC Genomics	2016
25720775	ChIP-exo signal associated with DNA-binding motifs provides insight into the genomic binding of the glucocorticoid receptor and cooperating transcription factors.	Genome Res	2015
25315429	Deletions of chromosomal regulatory boundaries are associated with congenital disease.	Genome Biol	2014
25280750	Clinical interpretation of CNVs with cross-species phenotype data.	J Med Genet	2014

1 - 13 of 13

Yunjiang Qiu

Ludwig Institute for Cancer Research, University of California

Career Start Year 2015

Number of shared co-authors 0

Yong Chen

Rowan University

Career Start Year 2013

Number of shared co-authors 0

Daniel Bates

Altius Institute for Biomedical Sciences

Career Start Year 2010

Number of shared co-authors 0

David U Gorkin

Center for Epigenomics, University of California San Diego

Career Start Year 2009

Number of shared co-authors 0

Bryan R Lajoie

NASA Ames Research Center

Career Start Year 2009

Number of shared co-authors 1

Alex P Reynolds

Altius Institute for Biomedical Sciences

Career Start Year 2009

Number of shared co-authors 0

Alan P Boyle

University of Michigan ann arbor

Career Start Year 2008

Number of shared co-authors 0

Chongzhi Zang

Center for Public Health Genomics, University of Virginia

Career Start Year 2008

Number of shared co-authors 0

Nathan Sheffield (CM4AI)

University of Virginia

Career Start Year 2007

Number of shared co-authors 1

Robin Andersson

University of Copenhagen

Career Start Year 2007

Number of shared co-authors 1

Amartya Sanyal

Nanyang Technological University

Career Start Year 2007

Number of shared co-authors 0

Stephen C J Parker

University of Michigan ann arbor

Career Start Year 2006

Number of shared co-authors 0

Shane Neph

Altius Institute for Biomedical Sciences

Career Start Year 2006

Number of shared co-authors 0

Robert E Thurman

University of Washington

Career Start Year 2005

Number of shared co-authors 0

Richard Sandstrom

Altius Institute for Biomedical Sciences

Career Start Year 2005

Number of shared co-authors 0

Anshul Kundaje

Stanford University.

Career Start Year 2004

Number of shared co-authors 0

Shyam Prabhakar

Genome Institute of Singapore (GIS)

Career Start Year 2004

Number of shared co-authors 0

Peter J Park

Harvard Medical School

Career Start Year 2001

Number of shared co-authors 2

Michael D Wilson

SickKids Research Institute

Career Start Year 2000

Number of shared co-authors 1

Benjamin P Berman

Institute for Medical Research Israel-Canada, The Hebrew University of Jerusalem

Career Start Year 2000

Number of shared co-authors 2

Terrence S Furey

University of North Carolina at Chapel Hill

Career Start Year 2000

Number of shared co-authors 1

Gregory E Crawford

Center for Genomic & Computational Biology, Duke University

Career Start Year 1999

Number of shared co-authors 1

Kai Tan

University of Pennsylvania

Career Start Year 1999

Number of shared co-authors 0

Guillaume Bourque

Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University

Career Start Year 1997

Number of shared co-authors 3

Laura Elnitski

National Human Genome Research Institute

Career Start Year 1997

Number of shared co-authors 0

Colin A Semple

Institute of Genetics and Cancer, University of Edinburgh

Career Start Year 1997

Number of shared co-authors 4

Job Dekker

University of Massachusetts Chan Medical School

Career Start Year 1996

Number of shared co-authors 1

Boris Lenhard

MRC London Institute of Medical Sciences

Career Start Year 1996

Number of shared co-authors 1

Bing Ren

Center for Epigenomics, University of California San Diego

Career Start Year 1995

Number of shared co-authors 3

John A Stamatoyannopoulos

Altius Institute for Biomedical Sciences

Career Start Year 1992

Number of shared co-authors 0

row(s) 1 - 30 of 30

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Co-authored papers 6

Peter N Robinson

William Harvey Research Institute, Queen Mary University of London

Co-authored papers 5

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Co-authored papers 2

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 2

Michael I Love

University of North Carolina at Chapel Hill

Co-authored papers 2

Sebastian K??hler

Division of Emergency Medicine University of Calgary Calgary Alberta Canada.

Co-authored papers 2

Melissa A Haendel

Co-authored papers 2

Ho-Ryun Chung

Institute of Medical Bioinformatics and Biostatistics, Philipps University of Marburg

Co-authored papers 2