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Author Details

Angel Pizarro
The Institute for Translational Medicine and Therapeutics, University of Pennsylvania
2001
25
20
PMIDPaper TitleJournal TitlePublished Year
35072136GA4GH: International policies and standards for data sharing across genomic research and healthcare.Cell Genom2021
26338770Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data.Bioinformatics2015
24981968IVT-seq reveals extreme bias in RNA sequencing.Genome Biol2014
23180795CircaDB: a database of mammalian circadian gene expression profiles.Nucleic Acids Res2013
22375074The mzIdentML data standard for mass spectrometry-based proteomics results.Mol Cell Proteomics2012
20716697mzML--a community standard for mass spectrometry data.Mol Cell Proteomics2011
21775302Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM).Bioinformatics2011
21903871The malaria parasite progressively dismantles the host erythrocyte cytoskeleton for efficient egress.Mol Cell Proteomics2011
19755503The Gene Wiki: community intelligence applied to human gene annotation.Nucleic Acids Res2010
19370153The post-synaptic density of human postmortem brain tissues: an experimental study paradigm for neuropsychiatric illnesses.PLoS One2009
19911947Elective affinities--bioinformatic analysis of proteomic mass spectrometry data.Arch Physiol Biochem2009
18212345Analysis of the zebrafish proteome during embryonic development.Mol Cell Proteomics2008
17164401EBP, a program for protein identification using multiple tandem mass spectrometry datasets.Mol Cell Proteomics2007
17907277Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative April 23-25, 2007 Ecole Nationale Supérieure (ENS), Lyon, France.Proteomics2007
17921998The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics.Nat Biotechnol2007
17274075Entering the implementation era: a report on the HUPO-PSI Fall workshop 25-27 September 2006, Washington DC, USA.Proteomics2007
16897683Proteomics and Beyond: a report on the 3rd Annual Spring Workshop of the HUPO-PSI 21-23 April 2006, San Francisco, CA, USA.Proteomics2006
16901224FuGE: Functional Genomics Experiment Object Model.OMICS2006
15145818An object model and database for functional genomics.Bioinformatics2004
14990441RAD and the RAD Study-Annotator: an approach to collection, organization and exchange of all relevant information for high-throughput gene expression studies.Bioinformatics2004
12829622Transcriptional program of the endocrine pancreas in mice and humans.Diabetes2003
14708120Maintaining data integrity in microarray data management.Biotechnol Bioeng2003
12086925Functional genomics of the endocrine pancreas: the pancreas clone set and PancChip, new resources for diabetes research.Diabetes2002
12225585Design and implementation of microarray gene expression markup language (MAGE-ML).Genome Biol2002
11301298A relational schema for both array-based and SAGE gene expression experiments.Bioinformatics2001
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Collaborators

Perelman School of Medicine, University of Pennsylvania
Co-authored papers 9
Institute of Systems, University of Liverpool
Co-authored papers 7
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 6
Perelman School of Medicine, University of Pennsylvania Philadelphia
Co-authored papers 5
Co-authored papers 4
Institute for Systems Biology
Co-authored papers 4
Co-authored papers 4
University of Pennsylvania.
Co-authored papers 4
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 4
Center for Spatial and Functional Genomics, Children's Hospital of Philadelphia
Co-authored papers 4
Oregon Health & Science University Hospital.
Co-authored papers 3
European Molecular Biology Laboratory- European Bioinformatics Institute
Co-authored papers 3
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Washington University School of Medicine
Co-authored papers 2
University of Pennsylvania
Co-authored papers 2
Co-authored papers 2
Children's Hospital of Philadelphia
Co-authored papers 2
University of Pennsylvania
Co-authored papers 2
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 2
at the University of Pennsylvania Perelman School of Medicine
Co-authored papers 2
Institute for Genome Sciences, University of Maryland School of Medicine
Co-authored papers 2
Garvan Institute of Medical Research
Co-authored papers 2
Center for Bioinformatics, University of Pennsylvania
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
University of Pennsylvania
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2