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Author Details

Peter Hufnagl
University of Applied Sciences (HTW) Berlin
1983
144
31
PMIDPaper TitleJournal TitlePublished Year
37205164Anonymization of whole slide images in histopathology for research and education.Digit Health2023
37543325Quantitative relationships among high-throughput sequencing, cyanobacteria toxigenic genotype abundance and microcystin occurrence in bathing waters.Sci Total Environ2023
34169666Diversity of West Nile and Usutu virus strains in mosquitoes at an international airport in Austria.Transbound Emerg Dis2022
36144363<i>Hyalomma</i> spp. in Austria-The Tick, the Climate, the Diseases and the Risk for Humans and Animals.Microorganisms2022
36088478Recommendations on compiling test datasets for evaluating artificial intelligence solutions in pathology.Mod Pathol2022
36151301Publisher Correction to: Recommendations on compiling test datasets for evaluating artificial intelligence solutions in pathology.Mod Pathol2022
35303559Emergence of SARS-CoV-2 Alpha lineage and its correlation with quantitative wastewater-based epidemiology data.Water Res2022
34968788EMPAIA App Interface: An open and vendor-neutral interface for AI applications in pathology.Comput Methods Programs Biomed2022
35323574First Nationwide Monitoring Program for the Detection of Potentially Invasive Mosquito Species in Austria.Insects2022
33307498Resilience of agricultural soils to antibiotic resistance genes introduced by agricultural management practices.Sci Total Environ2021
33718408Tracking the Origin of Austrian Human Brucellosis Cases Using Whole Genome Sequencing.Front Med (Lausanne)2021
34919184[EMPAIA-ecosystem for pathology diagnostics with AI assistance].Pathologe2021
34012717Artificial Intelligence in Pathology: From Prototype to Product.J Pathol Inform2021
34035246Multiplexed detection of SARS-CoV-2 and other respiratory infections in high throughput by SARSeq.Nat Commun2021
34024323Artificial Intelligence in Pathology.Dtsch Arztebl Int2021
33165914Computational augmentation of neoplastic endometrial glands in digital pathology displays.J Pathol2021
33219656Zoonotic Pathogens in Ticks from Migratory Birds, Italy.Emerg Infect Dis2020
32066455Assessment of scalability and performance of the record linkage tool E-PIX<sup>®</sup> in managing multi-million patients in research projects at a large university hospital in Germany.J Transl Med2020
33229462Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2.Sci Transl Med2020
30309555Development of a DNA metabarcoding method for the identification of fifteen mammalian and six poultry species in food.Food Chem2019
31394466Removal of extracellular free DNA and antibiotic resistance genes from water and wastewater by membranes ranging from microfiltration to reverse osmosis.Water Res2019
29330311Necrosis in anti-SRP<sup>+</sup> and anti-HMGCR<sup>+</sup>myopathies: Role of autoantibodies and complement.Neurology2018
29859766Computational morphogenesis - Embryogenesis, cancer research and digital pathology.Biosystems2018
30009873A general framework dedicated to computational morphogenesis Part II - Knowledge representation and architecture.Biosystems2018
30005999A general framework dedicated to computational morphogenesis Part I - Constitutive equations.Biosystems2018
30397786["Digital Pathology in Diagnostics-reporting on digital images" guideline of the Professional Association of German Pathologists].Pathologe2018
30621821Adult <i>Hyalomma marginatum</i> tick positive for <i>Rickettsia aeschlimannii</i> in Austria, October 2018.Euro Surveill2018
30442178Computational analysis reveals histotype-dependent molecular profile and actionable mutation effects across cancers.Genome Med2018
29623403["Digital Pathology in Diagnostics" guideline : Reporting on digital images].Pathologe2018
29704046[Implementation of the "Digital Pathology in Diagnostics" guideline : Support systems and their functionality].Pathologe2018
28676295Deep convolutional neural networks for automatic classification of gastric carcinoma using whole slide images in digital histopathology.Comput Med Imaging Graph2017
29234806Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer.JAMA2017
29127995Preface.Comput Med Imaging Graph2017
26806087Dermatomyositis With or Without Anti-Melanoma Differentiation-Associated Gene 5 Antibodies: Common Interferon Signature but Distinct NOS2 Expression.Am J Pathol2016
25515030Reproducibility of Her2/neu scoring in gastric cancer and assessment of the 10% cut-off rule.Cancer Med2015
26232739Antibiotic resistance marker genes as environmental pollutants in GMO-pristine agricultural soils in Austria.Environ Pollut2015
24194558Prevalence of the aminoglycoside phosphotransferase genes aph(3')-IIIa and aph(3')-IIa in Escherichia coli, Enterococcus faecalis, Enterococcus faecium, Pseudomonas aeruginosa, Salmonella enterica subsp. enterica and Staphylococcus aureus isolates in Austria.J Med Microbiol2014
24885284Autochthonous Dirofilaria repens in Austria.Parasit Vectors2014
24706491Cancer beyond organ and tissue specificity: next-generation-sequencing gene mutation data reveal complex genetic similarities across major cancers.Int J Cancer2014
23566354Long-term analysis to objectify the tumour grading by means of automated microscopic image analysis of the nucleolar organizer regions (AgNORs) in the case of breast carcinoma.Diagn Pathol2013
23445542CognitionMaster: an object-based image analysis framework.Diagn Pathol2013
21812836Impact of filaggrin mutations on Raman spectra and biophysical properties of the stratum corneum in mild to moderate atopic dermatitis.J Eur Acad Dermatol Venereol2012
23035717Determining similarity in histological images using graph-theoretic description and matching methods for content-based image retrieval in medical diagnostics.Diagn Pathol2012
22693132Telestroke ambulances in prehospital stroke management: concept and pilot feasibility study.Stroke2012
22787560Detection and segmentation of cell nuclei in virtual microscopy images: a minimum-model approach.Sci Rep2012
22361457High-resolution melting analysis of the single nucleotide polymorphism hot-spot region in the rpoB gene as an indicator of reduced susceptibility to rifaximin in Clostridium difficile.J Med Microbiol2012
21393159Real-time PCR for single-nucleotide polymorphism detection in the 16S rRNA gene as an indicator for extensive drug resistance in Mycobacterium tuberculosis.J Antimicrob Chemother2011
21622977Sequence capture and next generation resequencing of the MHC region highlights potential transplantation determinants in HLA identical haematopoietic stem cell transplantation.DNA Res2011
21489186Distributed computing in image analysis using open source frameworks and application to image sharpness assessment of histological whole slide images.Diagn Pathol2011
19134181Integration and acceleration of virtual microscopy as the key to successful implementation into the routine diagnostic process.Diagn Pathol2009
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Collaborators

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Sorbonne Universite, Institut du Cerveau-Paris Brain Institute-ICM, CNRS, Inserm
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Co-authored papers 2
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Co-authored papers 1
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Co-authored papers 1
Institute of Biomedical Engineering (IBME), University of Oxford
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University of Toronto
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Massachusetts General Hospital
Co-authored papers 1
German Center for Neurodegenerative Diseases (DZNE) Munich
Co-authored papers 1
Phoenix Children's Hospital
Co-authored papers 1
Hospital Clinico Universitario "Lozano Blesa"
Co-authored papers 1
Radboud University Medical Center
Co-authored papers 1
Middle East Technical University
Co-authored papers 1
University of Castilla-La Mancha
Co-authored papers 1
University Medical Center Utrecht
Co-authored papers 1
Massachusetts General Hospital, Harvard University
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NLP Logix LLC
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Huazhong Agricultural University
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California State University
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Alrijne Hospital Leiderdorp
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Beth Israel Deaconess Medical Center, Harvard Medical School
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Center for Mind/Brain Sciences
Co-authored papers 1
Kansai University
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Radboud University Medical Center
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CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
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