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Author Details

Steven Henikoff
Fred Hutchinson Cancer Center
1974
402
118
PMIDPaper TitleJournal TitlePublished Year
37935964Scalable single-cell profiling of chromatin modifications with sciCUT&Tag.Nat Protoc2024
38016477Epigenetic pioneering by SWI/SNF family remodelers.Mol Cell2024
38049663The BAF chromatin remodeler synergizes with RNA polymerase II and transcription factors to evict nucleosomes.Nat Genet2024
36316484Multifactorial profiling of epigenetic landscapes at single-cell resolution using MulTI-Tag.Nat Biotechnol2023
38014305Expansion of human centromeric arrays in cells undergoing break-induced replication.bioRxiv2023
37739938Epigenomic analysis of formalin-fixed paraffin-embedded samples by CUT&Tag.Nat Commun2023
37693371Chromatin Profiling of CBFA2T3-GLIS2 AMLs Identifies Key Transcription Factor Dependencies and BRG1 Inhibition as a Novel Therapeutic Strategy.bioRxiv2023
37777391Giant variations in giant virus genome packaging.Trends Biochem Sci2023
37873332Chromosome-specific maturation of the epigenome in the Drosophila male germline.bioRxiv2023
38032818Chromosome-specific maturation of the epigenome in the <i>Drosophila</i> male germline.Elife2023
37084735Transcriptional-translational conflict is a barrier to cellular transformation and cancer progression.Cancer Cell2023
37315134Aclarubicin stimulates RNA polymerase II elongation at closely spaced divergent promoters.Sci Adv2023
37205597CTCF-mediated insulation and chromatin environment modulate <i>Car5b</i> escape from X inactivation.bioRxiv2023
37473727β-catenin repositions over time.Cell Syst2023
36650052Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.Genome Res2023
36399432Nucleosome Patterns in Circulating Tumor DNA Reveal Transcriptional Regulation of Advanced Prostate Cancer Phenotypes.Cancer Discov2023
36712130Aclarubicin stimulates RNA polymerase II elongation at closely spaced divergent promoters.bioRxiv2023
36711459RNA Polymerase II, the BAF remodeler and transcription factors synergize to evict nucleosomes.bioRxiv2023
36706161A modular CRISPR screen identifies individual and combination pathways contributing to HIV-1 latency.PLoS Pathog2023
35300717CUT&amp;Tag2for1: a modified method for simultaneous profiling of the accessible and silenced regulome in single cells.Genome Biol2022
35624484Viral histones: pickpocket's prize or primordial progenitor?Epigenetics Chromatin2022
35524116CUT&amp;RUN Profiling of the Budding Yeast Epigenome.Methods Mol Biol2022
35361623The genetics and epigenetics of satellite centromeres.Genome Res2022
36644296The <i>Drosophila</i> embryo as a <i>tabula rasa</i> for the epigenome.Fac Rev2022
36372007Centromere drive: chromatin conflict in meiosis.Curr Opin Genet Dev2022
36170035In situ tools for chromatin structural epigenomics.Protein Sci2022
35985286Centromeres organize (epi)genome architecture.Cell2022
36192462Profiling RNA at chromatin targets in situ by antibody-targeted tagmentation.Nat Methods2022
35225231Global and context-specific transcriptional consequences of oncogenic Fbw7 mutations.Elife2022
35303789Managing the Steady State Chromatin Landscape by Nucleosome Dynamics.Annu Rev Biochem2022
33473122Short H2A histone variants are expressed in cancer.Nat Commun2021
33846646Single-cell CUT&amp;Tag analysis of chromatin modifications in differentiation and tumor progression.Nat Biotechnol2021
33927388The structure of a virus-encoded nucleosome.Nat Struct Mol Biol2021
33919233Sequence, Chromatin and Evolution of Satellite DNA.Int J Mol Sci2021
33781079The Yin and Yang of Histone Marks in Transcription.Annu Rev Genomics Hum Genet2021
33833427Remodeller-variant tag team slams transposons.Nat Cell Biol2021
33771851Histone variants at a glance.J Cell Sci2021
34783858High-throughput single-cell epigenomic profiling by targeted insertion of promoters (TIP-seq).J Cell Biol2021
34663924Automated CUT&amp;Tag profiling of chromatin heterogeneity in mixed-lineage leukemia.Nat Genet2021
34250209Simplified Epigenome Profiling Using Antibody-tethered Tagmentation.Bio Protoc2021
34280185The H3.3K27M oncohistone antagonizes reprogramming in Drosophila.PLoS Genet2021
31630896Epigenome Regulation by Dynamic Nucleosome Unwrapping.Trends Biochem Sci2020
32060267MYCN amplification and ATRX mutations are incompatible in neuroblastoma.Nat Commun2020
32097641Evolution: Heterochromatin Diversity in Early-Branching Land Plants.Curr Biol2020
32035948What makes a centromere?Exp Cell Res2020
33247132Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome.Nat Commun2020
33191916Efficient chromatin accessibility mapping in situ by nucleosome-tethered tagmentation.Elife2020
33362208Biparental contributions of the H2A.B histone variant control embryonic development in mice.PLoS Biol2020
32913232Efficient low-cost chromatin profiling with CUT&amp;Tag.Nat Protoc2020
32902381Histone deposition pathways determine the chromatin landscapes of H3.1 and H3.3 K27M oncohistones.Elife2020
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Collaborators

Harmit S Malik
Fred Hutchinson Cancer Center
Co-authored papers 17
Bas van Steensel
Oncode Institute, Netherlands Cancer Institute
Co-authored papers 6
Jeffrey J Delrow
Clinical Research Division, Fred Hutchinson Cancer Research Center
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Lincoln Stein
Ontario Institute for Cancer Research, University Avenue
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Mark Gerstein
Yale University
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David M MacAlpine
Co-authored papers 3
Suzanna E Lewis
Lawrence Berkeley National Laboratory
Co-authored papers 3
Jason D Lieb
The University of Chicago
Co-authored papers 3
Susan E Celniker
Lawrence Berkeley National Laboratory
Co-authored papers 3
Kevin P White
Co-authored papers 3
Manolis Kellis
Massachusetts Institute of Technology
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Eric C Lai
Co-authored papers 3
James M Olson
Clinical Research Division, Fred Hutchinson Cancer Center
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Christine M Disteche
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Juan Ausi??
University of Victoria
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Jay Shendure
University of Washington
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Leroy Hood
Center for Phenomic Health, The Buck Institute for Research on Aging
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Marc D Perry
Ontario Institute for Cancer Research
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Gary H Karpen
University of California Berkeley
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William Stafford Noble
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Raphael Gottardo
Fred Hutchinson Cancer Center
Co-authored papers 2
William James Kent
Co-authored papers 2
Elise A Feingold
Co-authored papers 2
Soheil Meshinchi
Fred Hutchinson Cancer Research Centre
Co-authored papers 2
Peer Bork
University of Wurzburg
Co-authored papers 2
Bruce Montgomery
Fred Hutchinson Cancer Center, University of Washington
Co-authored papers 2
Kristin C Gunsalus
Center for Genomics and Systems Biology, New York University Abu Dhabi (NYUAD)
Co-authored papers 2
Teresa K Attwood
Co-authored papers 2
Mark S Guyer
National Human Genome Research Institute
Co-authored papers 2
John M Greally
Co-authored papers 2
Release 1.2