Author details

Full Name

Serap Erkek

Affiliation

ORCID

Career Start Year

2010

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36697831	Author Correction: Genomic basis for RNA alterations in cancer.	Nature	2023
36127323	Primary cilia contribute to the aggressiveness of atypical teratoid/rhabdoid tumors.	Cell Death Dis	2022
30704404	InTAD: chromosome conformation guided analysis of enhancer target genes.	BMC Bioinformatics	2019
31708418	Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration.	Cell Rep	2019
30595504	Comprehensive Analysis of Chromatin States in Atypical Teratoid/Rhabdoid Tumor Identifies Diverging Roles for SWI/SNF and Polycomb in Gene Regulation.	Cancer Cell	2019
30446899	Functional relevance of genes predicted to be affected by epigenetic alterations in atypical teratoid/rhabdoid tumors.	J Neurooncol	2019
29551561	Opposing Effects of CREBBP Mutations Govern the Phenotype of Rubinstein-Taybi Syndrome and Adult SHH Medulloblastoma.	Dev Cell	2018
29489754	The landscape of genomic alterations across childhood cancers.	Nature	2018
29258295	Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling.	Nature	2018
27869826	Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking.	Nat Genet	2017
28726821	The whole-genome landscape of medulloblastoma subtypes.	Nature	2017
26814967	Active medulloblastoma enhancers reveal subgroup-specific cellular origins.	Nature	2016
26923874	Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes.	Cancer Cell	2016
27034506	Sperm is epigenetically programmed to regulate gene transcription in embryos.	Genome Res	2016
26449473	Disruption of histone methylation in developing sperm impairs offspring health transgenerationally.	Science	2015
25011554	In utero effects. In utero undernourishment perturbs the adult sperm methylome and intergenerational metabolism.	Science	2014
25043047	Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma.	Nature	2014
24847876	Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing.	Nature	2014
24232248	Genome-wide chromatin analysis in mature mouse and human spermatozoa.		2013
23770822	Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.	Nature Structural and Molecular Biology	2013
23857380	Na+/I- symporter and type 3 iodothyronine deiodinase gene expression in amniotic membrane and placenta and its relationship to maternal thyroid hormones.	Biological Trace Element Research	2013
23894443	Coiled-coil domain containing protein 124 is a novel centrosome and midbody protein that interacts with the Ras-guanine nucleotide exchange factor 1B and is involved in cytokinesis.	PLoS ONE	2013
22445736	Parental epigenetic control of embryogenesis: a balance between inheritance and reprogramming?	Current Opinion in Cell Biology	2012
20473313	Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa.	Nature Structural and Molecular Biology	2010