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Author Details

Dietrich Rebholz-Schuhmann
University of Cologne
2003
83
24
PMIDPaper TitleJournal TitlePublished Year
32750845Convolutional Embedded Networks for Population Scale Clustering and Bio-Ancestry Inferencing.IEEE/ACM Trans Comput Biol Bioinform2022
35073996Ontology-based identification and prioritization of candidate drugs for epilepsy from literature.J Biomed Semantics2022
32008043Deep learning-based clustering approaches for bioinformatics.Brief Bioinform2021
32167477The Application of Internet-Based Sources for Public Health Surveillance (Infoveillance): Systematic Review.J Med Internet Res2020
29579141Where to search top-K biomedical ontologies?Brief Bioinform2019
31500564Predicting links between tumor samples and genes using 2-Layered graph based diffusion approach.BMC Bioinformatics2019
31480718The Validity of Google Trends Search Volumes for Behavioral Forecasting of National Suicide Rates in Ireland.Int J Environ Res Public Health2019
31307129Biotea-2-Bioschemas, facilitating structured markup for semantically annotated scholarly publications.Genomics Inform2019
30962509Predicting knee osteoarthritis severity: comparative modeling based on patient's data and plain X-ray images.Sci Rep2019
28419324Improving data workflow systems with cloud services and use of open data for bioinformatics research.Brief Bioinform2018
29895320Disease mentions in airport and hospital geolocations expose dominance of news events for disease concerns.J Biomed Semantics2018
28927463Towards precision medicine: discovering novel gynecological cancer biomarkers and pathways using linked data.J Biomed Semantics2017
28298238BioFed: federated query processing over life sciences linked open data.J Biomed Semantics2017
28148277SAFE: SPARQL Federation over RDF Data Cubes with Access Control.J Biomed Semantics2017
26420780The digital revolution in phenotyping.Brief Bioinform2016
24197933The semantic web in translational medicine: current applications and future directions.Brief Bioinform2015
26507285PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.Database (Oxford)2015
26202680Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task.BMC Bioinformatics2015
25948699A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC.J Am Med Inform Assoc2015
23434632Biological network extraction from scientific literature: state of the art and challenges.Brief Bioinform2014
24602198Thematic series on biomedical ontologies in JBMS: challenges and new directions.J Biomed Semantics2014
24177719The functional therapeutic chemical classification system.Bioinformatics2014
24201223A case study: semantic integration of gene-disease associations for type 2 diabetes mellitus from literature and biomedical data resources.Drug Discov Today2014
23365570Literature mining solutions for life science research.Adv Bioinformatics2013
24131519Automatically transforming pre- to post-composed phenotypes: EQ-lising HPO and MP.J Biomed Semantics2013
24124474Evaluation and cross-comparison of lexical entities of biological interest (LexEBI).PLoS One2013
24112383Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources.J Biomed Semantics2013
24155869Learning to recognize phenotype candidates in the auto-immune literature using SVM re-ranking.PLoS One2013
24034148Monitoring named entity recognition: the League Table.J Biomed Semantics2013
23640984PCorral--interactive mining of protein interactions from MEDLINE.Database (Oxford)2013
23505292Brain: biomedical knowledge manipulation.Bioinformatics2013
23247259Towards virtual knowledge broker services for semantic integration of life science literature and data sources.Drug Discov Today2013
22174294Linking PharmGKB to phenotype studies and animal models of disease for drug repurposing.Pac Symp Biocomput2012
22950424Systems biology and bioinformatics in aging research: a workshop report.Rejuvenation Res2012
23150036Text-mining solutions for biomedical research: enabling integrative biology.Nat Rev Genet2012
23046555Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology.J Biomed Semantics2012
22719993Improving disease gene prioritization by comparing the semantic similarity of phenotypes in mice with those of human diseases.PLoS One2012
22879774Three hybrid classifiers for the detection of emotions in suicide notes.Biomed Inform Insights2012
22321698Automatic recognition of conceptualization zones in scientific articles and two life science applications.Bioinformatics2012
22419783Harmonization of gene/protein annotations: towards a gold standard MEDLINE.Bioinformatics2012
21062818UKPMC: a full text article resource for the life sciences.Nucleic Acids Res2011
21992002The BioLexicon: a large-scale terminological resource for biomedical text mining.BMC Bioinformatics2011
22166672Improving the extraction of complex regulatory events from scientific text by using ontology-based inference.J Biomed Semantics2011
22166494Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.J Biomed Semantics2011
22166341Ontology design patterns to disambiguate relations between genes and gene products in GENIA.J Biomed Semantics2011
22166304Towards mature use of semantic resources for biomedical analyses.J Biomed Semantics2011
21789201Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoning.PLoS One2011
21343142A common layer of interoperability for biomedical ontologies based on OWL EL.Bioinformatics2011
19818874Measuring prediction capacity of individual verbs for the identification of protein interactions.J Biomed Inform2010
20807438Relations as patterns: bridging the gap between OBO and OWL.BMC Bioinformatics2010
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Collaborators

Anika Oellrich
King's College London
Co-authored papers 13
Robert Hoehndorf
King Abdullah University of Science and Technology
Co-authored papers 12
Antonio Jimeno Yepes
Co-authored papers 10
Vivian Lee
Keck School of Medicine of USC, University of Southern
Co-authored papers 6
Udo Hahn
Friedrich Schiller University Jena
Co-authored papers 5
Erik M van Mulligen
Erasmus University Medical Center
Co-authored papers 5
Georgios V Gkoutos
Institute of Cancer and Genomic Sciences, University of Birmingham
Co-authored papers 5
Michel Dumontier
Institute of Data Science, Maastricht University
Co-authored papers 4
Jan A Kors
Erasmus MC - University Medical Center Rotterdam
Co-authored papers 3
Dominic Clark
European Bioinformatics Institute
Co-authored papers 3
Paul N Schofield
University of Cambridge
Co-authored papers 3
Christopher J O Baker
University of New Brunswick
Co-authored papers 2
Peter N Robinson
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 2
Fabio Rinaldi
Co-authored papers 2
John P Overington
Institute of Cardiovascular Science, University College London
Co-authored papers 2
Tudor Groza
Perth Children's Hospital
Co-authored papers 2
Ioannis Tollis
Co-authored papers 2
Simon Clematide
Co-authored papers 2
Ernesto Jim??nez-Ruiz
City University of London
Co-authored papers 2
Antonio Jimeno
University of Colorado School of Medicine
Co-authored papers 2
Patrick Ruch
University of Applied Sciences and Arts of Western Switzerland (HES-SO).
Co-authored papers 2
Fernando Martin-Sanchez
Institute of Health 'Carlos III'
Co-authored papers 2
Anne-Lise Veuthey
Co-authored papers 2
Leyla Garcia
European Bioinformatics Institute
Co-authored papers 2
Goran Nenadic
Co-authored papers 2
Sophia Ananiadou
Co-authored papers 2
Luciano Milanesi
Institute of Biomedical Technologies - National Research Council of Italy
Co-authored papers 2
Johan van der Lei
Erasmus Medical Center
Co-authored papers 2
Antoine Geissbuhler
University of Geneva
Co-authored papers 2
Manuel C Peitsch
Philip Morris International Research Laboratories Pte. Ltd
Co-authored papers 1
Release 1.2