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Author Details

Hui-Yin Chang
2010
17
12
PMIDPaper TitleJournal TitlePublished Year
37301840Tailored therapeutic decision of rheumatoid arthritis using proteomic strategies: how to start and when to stop?2023
36475762Implementing the MSFragger Search Engine as a Node in Proteome Discoverer.J Proteome Res2023
36315902Comparative Evaluation of Proteome Discoverer and FragPipe for the TMT-Based Proteome Quantification.J Proteome Res2022
36130656Peritoneal effluent MicroRNA profile for detection of encapsulating peritoneal sclerosis.Clinica Chimica Acta2022
33417831Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.Cancer Cell2021
33467846A Practical Guide to Metabolomics Software Development.Anal Chem2021
32669682Philosopher: a versatile toolkit for shotgun proteomics data analysis.Nat Methods2020
32265444Quantitative proteomic landscape of metaplastic breast carcinoma pathological subtypes and their relationship to triple-negative tumors.Nat Commun2020
32338005Crystal-C: A Computational Tool for Refinement of Open Search Results.J Proteome Res2020
31923397Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.Cell2020
31675502Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.Cell2019
29165996iTop-Q: an Intelligent Tool for Top-down Proteomics Quantitation Using DYAMOND Algorithm.Anal Chem2017
27084943MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification.Nucleic Acids Res2016
26784691iMet-Q: A User-Friendly Tool for Label-Free Metabolomics Quantitation Using Dynamic Peak-Width Determination.PLoS One2016
26549055Informatics View on the Challenges of Identifying Missing Proteins from Shotgun Proteomics.J Proteome Res2015
25543920Metabolite identification for mass spectrometry-based metabolomics using multiple types of correlated ion information.Anal Chem2015
20572634Identification of tyrosine-phosphorylated proteins associated with lung cancer metastasis using label-free quantitative analyses.Journal of Proteome Research2010
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Collaborators

Alexey I Nesvizhskii
University of Michigan ann arbor
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Felipe da Veiga Leprevost
University of Michigan ann arbor
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Ting-Yi Sung
School of Pharmacy, College of Medicine, National Taiwan University
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Wen-Lian Hsu
Institute of Information Science
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Dmitry M Avtonomov
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Ching-Tai Chen
Asia University
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Andy T Kong
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Yize Li
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Jiang Qian
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Gilbert S Omenn
and School of Public Health, University of Michigan ann arbor
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Yingwei Hu
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Ana I Robles
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Daniel W Chan
Division of Clinical Chemistry, Johns Hopkins University
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Christopher R Kinsinger
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Arul M Chinnaiyan
University of Michigan Medical School.
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Mehdi Mesri
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Marcin Cieslik
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Jianbo Pan
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David J Clark
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Li Ding
McDonnell Genome Institute, Washington University School of Medicine
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Michael Schnaubelt
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Maciej Wiznerowicz
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Zhen Zhang
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Jiayi Ji
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Kyung-Cho Cho
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Lijun Chen
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Tara Hiltke
Office of Cancer Clinical Proteomics Research, National Cancer Institute
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Mathangi Thiagarajan
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Hui Zhang
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Saravana M Dhanasekaran
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