Author details

Full Name

Sebastian Bauer

Affiliation

Institute for Medical Genetics and Human Genetics, Charite-Universitatsmedizin Berlin

ORCID

Career Start Year

2006

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
27812943	Gene-Category Analysis.	Methods Mol Biol	2017
24217912	The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data.	Nucleic Acids Res	2014
25315429	Deletions of chromosomal regulatory boundaries are associated with congenital disease.	Genome Biol	2014
24677618	Jannovar: a java library for exome annotation.	Hum Mutat	2014
24162188	Improved exome prioritization of disease genes through cross-species phenotype comparison.	Genome Res	2014
23104991	Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish.	Dis Model Mech	2013
22127862	The allele distribution in next-generation sequencing data sets is accurately described as the result of a stochastic branching process.	Nucleic Acids Res	2012
22843981	Bayesian ontology querying for accurate and noise-tolerant semantic searches.	Bioinformatics	2012
21278187	Identity-by-descent filtering of exome sequence data for disease-gene identification in autosomal recessive disorders.	Bioinformatics	2011
22078312	Exact score distribution computation for ontological similarity searches.	BMC Bioinformatics	2011
22032770	Improving ontologies by automatic reasoning and evaluation of logical definitions.	BMC Bioinformatics	2011
21561920	Model-based gene set analysis for Bioconductor.	Bioinformatics	2011
21109530	Integrative analysis of genomic, functional and protein interaction data predicts long-range enhancer-target gene interactions.	Nucleic Acids Res	2011
19882684	In vitro inhibition of fungal activity by macrophage-mediated sequestration and release of encapsulated amphotericin B nanosupension in red blood cells.	Small	2010
20802478	Identity-by-descent filtering of exome sequence data identifies PIGV mutations in hyperphosphatasia mental retardation syndrome.	Nat Genet	2010
20172960	GOing Bayesian: model-based gene set analysis of genome-scale data.	Nucleic Acids Res	2010
20144947	Microindel detection in short-read sequence data.	Bioinformatics	2010
19257815	Promiscuous and depolarization-induced immediate-early response genes are induced by mechanical strain of osteoblasts.	J Bone Miner Res	2009
19660540	Short ultraconserved promoter regions delineate a class of preferentially expressed alternatively spliced transcripts.	Genomics	2009
19800049	Clinical diagnostics in human genetics with semantic similarity searches in ontologies.	Am J Hum Genet	2009
17996480	A short ultraconserved sequence drives transcription from an alternate FBN1 promoter.	Int J Biochem Cell Biol	2008
18950739	The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease.	Am J Hum Genet	2008
18511468	Ontologizer 2.0--a multifunctional tool for GO term enrichment analysis and data exploration.	Bioinformatics	2008
18283030	The generalised k-Truncated Suffix Tree for time-and space-efficient searches in multiple DNA or protein sequences.	Int J Bioinform Res Appl	2008
18371930	Walking the interactome for prioritization of candidate disease genes.	Am J Hum Genet	2008
17848398	Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis.	Bioinformatics	2007
16822315	Gene identification and analysis of transcripts differentially regulated in fracture healing by EST sequencing in the domestic sheep.	BMC Genomics	2006

1 - 27 of 27

Alfonso E Romero

University of Miami

Career Start Year 2012

Number of shared co-authors 1

Hai Fang

University of Bristol

Career Start Year 2006

Number of shared co-authors 2

L??on-Charles Tranchevent

University of Luxembourg

Career Start Year 2006

Number of shared co-authors 2

Alberto Paccanaro

University of London

Career Start Year 2005

Number of shared co-authors 1

Wenjin Jim Zheng

University of Texas Health Science Center at Houston

Career Start Year 2004

Number of shared co-authors 1

Rebecca E Foulger

Queen Mary University of London

Career Start Year 2003

Number of shared co-authors 16

Chunlei Wu

The Scripps Research Institute

Career Start Year 2002

Number of shared co-authors 3

Olga G Troyanskaya

Lewis-Sigler Institute for Integrative Genomics, Princeton University

Career Start Year 2001

Number of shared co-authors 1

Alberto Pascual-Montano

National Center for Biotechnology-CSIC

Career Start Year 2001

Number of shared co-authors 0

Andrew I Su

The Scripps Research Institute

Career Start Year 2001

Number of shared co-authors 1

Petri T??r??nen

Institute of Biotechnology, University of Helsinki

Career Start Year 1999

Number of shared co-authors 1

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 2

Frederick P Roth

University of Toronto

Career Start Year 1998

Number of shared co-authors 3

Ralf Herwig

Max Planck Institute for Molecular Genetics

Career Start Year 1998

Number of shared co-authors 2

Georg Fuellen

Rostock University Medical Center

Career Start Year 1996

Number of shared co-authors 2

Jaak Vilo

Institute of Computer Science, University of Tartu

Career Start Year 1996

Number of shared co-authors 0

Ron Shamir

Tel Aviv University

Career Start Year 1995

Number of shared co-authors 0

Ralf Zimmer

Ludwig-Maximilians-Universitat Munchen

Career Start Year 1995

Number of shared co-authors 0

Ioannis Xenarios

University of Lausanne

Career Start Year 1994

Number of shared co-authors 4

Simon Kasif

Boston University

Career Start Year 1993

Number of shared co-authors 0

Winston Hide

Harvard Medical School

Career Start Year 1991

Number of shared co-authors 4

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 4

Paul D Thomas

University of Southern California

Career Start Year 1991

Number of shared co-authors 4

Gabriel F Berriz

Harvard Medical School

Career Start Year 1991

Number of shared co-authors 0

Robert Gentleman

Center for Computational Biomedicine, Harvard Medical School

Career Start Year 1991

Number of shared co-authors 5

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 5

John Quackenbush

Harvard T. H. Chan School of Public Health

Career Start Year 1989

Number of shared co-authors 2

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Career Start Year 1986

Number of shared co-authors 7

Joaqu??n Dopazo

Andalusian Public Foundation Progress and Health-FPS

Career Start Year 1977

Number of shared co-authors 0

Yves Moreau

KU Leuven - University of Leuven

Career Start Year 1967

Number of shared co-authors 18

row(s) 1 - 30 of 30

Peter N Robinson

William Harvey Research Institute, Queen Mary University of London

Co-authored papers 25

Sebastian K??hler

Division of Emergency Medicine University of Calgary Calgary Alberta Canada.

Co-authored papers 13

Peter M Krawitz

Institute for Genomic Statistics and Bioinformatics, University of Bonn

Co-authored papers 7

Stefan Mundlos

Max Planck Institute for Molecular Genetics

Co-authored papers 7

Jochen Hecht

The Barcelona Institute of Science and Technology

Co-authored papers 5

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 5

Damian Smedley

William Harvey Research Institute, Queen Mary University of London

Co-authored papers 5

Denise Horn

Institute of Medical and Human Genetics, Charite - Universitatsmedizin Berlin

Co-authored papers 4

Suzanna E Lewis

Lawrence Berkeley National Laboratory

Co-authored papers 4

Paul N Schofield

University of Cambridge

Co-authored papers 4

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Co-authored papers 3

Nicole L Washington

Renaissance Computing Institute, University of North Carolina

Co-authored papers 3

Sandra C Doelken

Institute for Medical Genetics and Human Genetics, Charite Universitatsmedizin Berlin

Co-authored papers 3

Cynthia L Smith

Skirball Institute for Biomolecular Medicine, New York University Medical School

Co-authored papers 3

Georgios V Gkoutos

Institute of Cancer and Genomic Sciences, University of Birmingham