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Author Details

William Klimke
1998
29
21
PMIDPaper TitleJournal TitlePublished Year
38085797Putting everything in its place: using the INSDC compliant Pathogen Data Object Model to better structure genomic data submitted for public health applications.2023
36370100Database resources of the National Center for Biotechnology Information in 2023.Nucleic Acids Res2023
35259246Use of Whole Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States.J Food Prot2022
35380458Consensus on β-Lactamase Nomenclature.Antimicrob Agents Chemother2022
35675101Curation of the AMRFinderPlus databases: applications, functionality and impact.Microb Genom2022
33095870Database resources of the National Center for Biotechnology Information.Nucleic Acids Res2021
34135355AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence.Sci Rep2021
32209564Erratum for Feldgarden et al., "Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates".Antimicrob Agents Chemother2020
31712217A Standard Numbering Scheme for Class C β-Lactamases.Antimicrob Agents Chemother2020
31346170FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science.Nat Commun2019
31427293Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates.Antimicrob Agents Chemother2019
30053115Proposal for assignment of allele numbers for mobile colistin resistance (mcr) genes.J Antimicrob Chemother2018
29372115Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance.PeerJ2017
27261266Comment on: Resistance gene naming and numbering: is it a new gene or not?J Antimicrob Chemother2016
27090985Implementation of Nationwide Real-time Whole-genome Sequencing to Enhance Listeriosis Outbreak Detection and Investigation.Clin Infect Dis2016
24013487The COMBREX project: design, methodology, and initial results.PLoS Biol2013
23110974Recent advances in biocuration: meeting report from the Fifth International Biocuration Conference.Database (Oxford)2012
22180819Solving the Problem: Genome Annotation Standards before the Data Deluge.Stand Genomic Sci2011
21994619Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop.Viruses2010
18927115NCBI Reference Sequences: current status, policy and new initiatives.Nucleic Acids Res2009
18940865The National Center for Biotechnology Information's Protein Clusters Database.Nucleic Acids Res2009
18416670Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation.OMICS2008
17675389Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome.J Bacteriol2007
17259615Entry exclusion in F-like plasmids requires intact TraG in the donor that recognizes its cognate TraS in the recipient.Microbiology (United Kingdom)2007
16272376The mating pair stabilization protein, TraN, of the F plasmid is an outer-membrane protein with two regions that are important for its function in conjugation.Microbiology (United Kingdom)2005
12855161F factor conjugation is a true type IV secretion system.FEMS Microbiology Letters2003
12206753Analysis and characterization of the IncFV plasmid pED208 transfer region.Plasmid2002
10464182Comparison of proteins involved in pilus synthesis and mating pair stabilization from the related plasmids F and R100-1: insights into the mechanism of conjugation.Journal of Bacteriology1999
9696748Genetic analysis of the role of the transfer gene, traN, of the F and R100-1 plasmids in mating pair stabilization during conjugation.Journal of Bacteriology1998
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Center for Food Safety and Applied Nutrition, College Park
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Institute for Genome Sciences, University of Maryland School of Medicine
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National Center for Biotechnology Information, National Institutes of Health
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European Bioinformatics Institute (EMBL-EBI)
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The MITRE Corporation
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University of Maryland School of Medicine, Institute for Genome Sciences
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Iowa State University
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Stanford University
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