Author details

Full Name

Ji-Hoon Cho

Affiliation

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36781850	Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia.	Nat Commun	2023
36894563	Author Correction: Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia.	Nat Commun	2023
37425900	Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing is associated with therapeutic response to splicing inhibitor.	bioRxiv	2023
35315655	Deep Single-Cell-Type Proteome Profiling of Mouse Brain by Nonsurgical AAV-Mediated Proximity Labeling.	Anal Chem	2022
36636325	Alzheimer's disease-associated U1 snRNP splicing dysfunction causes neuronal hyperexcitability and cognitive impairment.	Nat Aging	2022
34587451	JUMPt: Comprehensive Protein Turnover Modeling of In Vivo Pulse SILAC Data by Ordinary Differential Equations.	Analytical Chemistry	2021
34747401	JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics.	Journal of Visualized Experiments	2021
32894271	High-throughput and Deep-proteome Profiling by 16-plex Tandem Mass Tag Labeling Coupled with Two-dimensional Chromatography and Mass Spectrometry.	Journal of Visualized Experiments	2020
31959236	Core transcriptional regulatory circuits in prion diseases.	Mol Brain	2020
32408578	JUMPm: A Tool for Large-Scale Identification of Metabolites in Untargeted Metabolomics.	Metabolites	2020
32343560	27-Plex Tandem Mass Tag Mass Spectrometry for Profiling Brain Proteome in Alzheimer's Disease.	Analytical Chemistry	2020
31926610	Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer's Disease Progression.	Neuron	2020
32437656	Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer's Disease Progression.	Neuron	2020
32711556	Integrated analysis of ultra-deep proteomes in cortex, cerebrospinal fluid and serum reveals a mitochondrial signature in Alzheimer's disease.	Mol Neurodegener	2020
31420543	Deep multiomics profiling of brain tumors identifies signaling networks downstream of cancer driver genes.	Nat Commun	2019
30922922	Metabolic switching in pluripotent stem cells reorganizes energy metabolism and subcellular organelles.	Experimental Cell Research	2019
31079852	Corrigendum to "Metabolic switching in pluripotent stem cells reorganizes energy metabolism and subcellular organelles" [379 (2019) 55-64].	Experimental Cell Research	2019
31019427	Deep undepleted human serum proteome profiling toward biomarker discovery for Alzheimer's disease.	Clin Proteomics	2019
29790753	Target-Decoy-Based False Discovery Rate Estimation for Large-Scale Metabolite Identification.	J Proteome Res	2018
29883117	Isotope Labeling-Assisted Evaluation of Hydrophilic and Hydrophobic Liquid Chromatograph-Mass Spectrometry for Metabolomics Profiling.	Anal Chem	2018
30146332	Identification of Therapeutic Targets in Rhabdomyosarcoma through Integrated Genomic, Epigenomic, and Proteomic Analyses.	Cancer Cell	2018
28194965	Extensive Peptide Fractionation and y Ion-Based Interference Detection Method for Enabling Accurate Quantification by Isobaric Labeling and Mass Spectrometry.	Analytical Chemistry	2017
28597562	Reprogramming progeria fibroblasts re-establishes a normal epigenetic landscape.	Aging Cell	2017
29286450	Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification.	J Vis Exp	2017
28285833	Integrative Proteomics and Phosphoproteomics Profiling Reveals Dynamic Signaling Networks and Bioenergetics Pathways Underlying T Cell Activation.	Immunity	2017
27225868	JUMPg: An Integrative Proteogenomics Pipeline Identifying Unannotated Proteins in Human Brain and Cancer Cells.	J Proteome Res	2016
25931508	Sequential Elution Interactome Analysis of the Mind Bomb 1 Ubiquitin Ligase Reveals a Novel Role in Dendritic Spine Outgrowth.	Mol Cell Proteomics	2015
24516145	Molecular evidence of stress-induced acute heart injury in a mouse model simulating posttraumatic stress disorder.	Proc Natl Acad Sci U S A	2014
25282157	Protein and microRNA biomarkers from lavage, urine, and serum in military personnel evaluated for dyspnea.	BMC Med Genomics	2014
23720668	A Review of Computational Tools in microRNA Discovery.	Front Genet	2013
23690939	Francisella tularensis subsp. tularensis induces a unique pulmonary inflammatory response: role of bacterial gene expression in temporal regulation of host defense responses.	PLoS One	2013
23358195	The spectrum of circulating RNA: a window into systems toxicology.	Toxicological Sciences	2013
21940491	Gene expression networks in COPD: microRNA and mRNA regulation.	Thorax	2012
22863622	Notch1 counteracts WNT/Î²-catenin signaling through chromatin modification in colorectal cancer.	Journal of Clinical Investigation	2012
22859996	Comparing the MicroRNA spectrum between serum and plasma.	PLoS ONE	2012
22075182	The systems biology of neurofibromatosis type 1--critical roles for microRNA.	Experimental Neurology	2012
21595033	Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.	Proteomics	2011
21460253	MicroRNA as biomarkers and regulators in B-cell chronic lymphocytic leukemia.	Proc Natl Acad Sci U S A	2011
21241464	Systems biology of interstitial lung diseases: integration of mRNA and microRNA expression changes.	BMC Med Genomics	2011
21791051	An integrative approach to inferring biologically meaningful gene modules.	BMC Systems Biology	2011
20071342	Direct transfer of alpha-synuclein from neuron to astroglia causes inflammatory responses in synucleinopathies.	J Biol Chem	2010
19930720	Colorectal cancer cell-derived microvesicles are enriched in cell cycle-related mRNAs that promote proliferation of endothelial cells.	BMC Genomics	2009
19308092	A systems approach to prion disease.	Mol Syst Biol	2009
19668381	Integrated expression profiling and ChIP-seq analyses of the growth inhibition response program of the androgen receptor.	PLoS One	2009
19203193	Proteomic analysis of a PDEF Ets transcription factor-interacting protein complex.	Journal of Proteome Research	2009
19655815	'Two-stage double-technique hybrid (TSDTH)' identification strategy for the analysis of BMP2-induced transdifferentiation of premyoblast C2C12 cells to osteoblast.	J Proteome Res	2009
15280023	Gene selection and classification from microarray data using kernel machine.	FEBS Letters	2004
12965195	New gene selection method for classification of cancer subtypes considering within-class variation.	FEBS Letters	2003
11936675	Cascade control strategy for external carbon dosage in predenitrifying process.	Water Science and Technology	2002
12153320	Optimal approach for classification of acute leukemia subtypes based on gene expression data.	Biotechnology Progress	2002