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Author Details

Stacia R Engel
Stanford University
1998
36
21
PMIDPaper TitleJournal TitlePublished Year
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
36607068Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources.Genetics2023
34897464New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources.Genetics2022
31612944Transcriptome visualization and data availability at the Saccharomyces Genome Database.Nucleic Acids Res2020
32875947Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.Open Biol2020
32559296Automated generation of gene summaries at the Alliance of Genome Resources.Database (Oxford)2020
29140510Saccharomyces genome database informs human biology.Nucleic Acids Res2018
30224793Model organism data evolving in support of translational medicine.Lab Anim (NY)2018
29688362Updated regulation curation model at the Saccharomyces Genome Database.Database (Oxford)2018
29761454An Introduction to the Saccharomyces Genome Database (SGD).Methods Mol Biol2018
27794554RNAcentral: a comprehensive database of non-coding RNA sequences.Nucleic Acids Res2017
28365727Curated protein information in the Saccharomyces genome database.Database (Oxford)2017
28365719Outreach and online training services at the Saccharomyces Genome Database.Database (Oxford)2017
26989152From one to many: expanding the Saccharomyces cerevisiae reference genome panel.Database (Oxford)2016
26578556The Saccharomyces Genome Database Variant Viewer.Nucleic Acids Res2016
27252399Integration of new alternative reference strain genome sequences into the Saccharomyces genome database.Database (Oxford)2016
25781462AGAPE (Automated Genome Analysis PipelinE) for pan-genome analysis of Saccharomyces cerevisiae.PLoS One2015
26017550Correction: AGAPE (Automated Genome Analysis PipelinE) for Pan-Genome Analysis of Saccharomyces cerevisiae.PLoS One2015
24265222Saccharomyces genome database provides new regulation data.Nucleic Acids Res2014
24374639The reference genome sequence of Saccharomyces cerevisiae: then and now.G3 (Bethesda)2014
23161678Gene Ontology annotations and resources.Nucleic Acids Res2013
23487186The new modern era of yeast genomics: community sequencing and the resulting annotation of multiple Saccharomyces cerevisiae strains at the Saccharomyces Genome Database.Database (Oxford)2013
22110037Saccharomyces Genome Database: the genomics resource of budding yeast.Nucleic Acids Res2012
19906697Saccharomyces Genome Database provides mutant phenotype data.Nucleic Acids Res2010
20157474New mutant phenotype data curation system in the Saccharomyces Genome Database.Database (Oxford)2009
17982175Gene Ontology annotations at SGD: new data sources and annotation methods.Nucleic Acids Res2008
17142221Expanded protein information at SGD: new pages and proteome browser.Nucleic Acids Res2007
16381907Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.Nucleic Acids Res2006
17001629Saccharomyces cerevisiae S288C genome annotation: a working hypothesis.Yeast2006
15608219Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD).Nucleic Acids Res2005
14681407The Gene Ontology (GO) database and informatics resource.Nucleic Acids Res2004
15153302Saccharomyces genome database: underlying principles and organisation.Brief Bioinform2004
14681421Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.Nucleic Acids Res2004
12519985Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins.Nucleic Acids Res2003
18944731Genetic analysis of eutypa strains from california supports the presence of two pathogenic species.Phytopathology1999
9491603Molecular systematics and paleobiogeography of the South American sigmodontine rodents.Mol Biol Evol1998
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Collaborators

J Michael Cherry
Stanford University
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Robert S Nash
Stanford University
Co-authored papers 24
Shuai Weng
Stanford University
Co-authored papers 22
Gail Binkley
Stanford University
Co-authored papers 18
Marek S Skrzypek
Stanford University
Co-authored papers 18
Edith D Wong
Stanford University
Co-authored papers 17
Maria C Costanzo
The Broad Institute of Harvard and MIT
Co-authored papers 16
Rama Balakrishnan
Genentech Inc.
Co-authored papers 14
Dianna G Fisk
Stanford Medicine Clinical Genomics Program
Co-authored papers 13
Kalpana Karra
Stanford University
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Eurie L Hong
Stanford University School of Medicine
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Selina S Dwight
Stanford University School of Medicine
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Stuart R Miyasato
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Karen R Christie
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Kara Dolinski
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Benjamin C Hitz
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Chandra L Theesfeld
Lewis-Sigler Institute for Integrative Genomics, Princeton University
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Julie Park
Stanford University
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Mark Schroeder
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Valerie Wood
University of Cambridge
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Rose Oughtred
Lewis-Sigler Institute for Integrative Genomics, Princeton University
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Ranjana Kishore
California Institute of Technology
Co-authored papers 4
Judith A Blake
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David P Hill
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Pascale Gaudet
University of Geneva
Co-authored papers 4
Paul W Sternberg
California Institute of Technology
Co-authored papers 4
Tanya Z Berardini
Carnegie Institution for Science
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Release 1.2