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Author Details

Jeff De Pons
Medical College of Wisconsin
2009
29
15
PMIDPaper TitleJournal TitlePublished Year
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
37119810Rare disease research resources at the Rat Genome Database.Genetics2023
369307292022 updates to the Rat Genome Database: a Findable, Accessible, Interoperable, and Reusable (FAIR) resource.Genetics2023
34741192The Rat Genome Database (RGD) facilitates genomic and phenotypic data integration across multiple species for biomedical research.Mamm Genome2022
35380657MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses.Genetics2022
36553571Ontological Analysis of Coronavirus Associated Human Genes at the COVID-19 Disease Portal.Genes (Basel)2022
31713623The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform.Nucleic Acids Res2020
30753478Integrated curation and data mining for disease and phenotype models at the Rat Genome Database.Database (Oxford)2019
31228152Rat Genome Databases, Repositories, and Tools.Methods Mol Biol2019
29761460A Primer for the Rat Genome Database (RGD).Methods Mol Biol2018
27009807The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database.Database (Oxford)2016
27736745Exploring human disease using the Rat Genome Database.Dis Model Mech2016
27173523The Chinchilla Research Resource Database: resource for an otolaryngology disease model.Database (Oxford)2016
25355511The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease.Nucleic Acids Res2015
27602200Disease, Models, Variants and Altered Pathways-Journeying RGD Through the Magnifying Glass.Comput Struct Biotechnol J2015
25619558OntoMate: a text-mining tool aiding curation at the Rat Genome Database.Database (Oxford)2015
25217576Improved rat genome gene prediction by integration of ESTs with RNA-Seq information.Bioinformatics2015
24499703The pathway ontology - updates and applications.J Biomed Semantics2014
25265995Disease pathways at the Rat Genome Database Pathway Portal: genes in context-a network approach to understanding the molecular mechanisms of disease.Hum Genomics2014
25172839CXM: a new tool for mapping breast cancer risk in the tumor microenvironment.Cancer Res2014
23379628The updated RGD Pathway Portal utilizes increased curation efficiency and provides expanded pathway information.Hum Genomics2013
24103152The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications.J Biomed Semantics2013
23881287Rat Genome Database: a unique resource for rat, human, and mouse quantitative trait locus data.Physiol Genomics2013
23603846PhenoMiner: quantitative phenotype curation at the rat genome database.Database (Oxford)2013
23434633The Rat Genome Database 2013--data, tools and users.Brief Bioinform2013
22434847Ontology searching and browsing at the Rat Genome Database.Database (Oxford)2012
21478484The Rat Genome Database pathway portal.Database (Oxford)2011
21321022The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data.Database (Oxford)2011
18996890The Rat Genome Database 2009: variation, ontologies and pathways.Nucleic Acids Res2009
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Collaborators

Medical College of Wisconsin
Co-authored papers 26
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Co-authored papers 25
Medical College of Wisconsin
Co-authored papers 24
Medical College of Wisconsin
Co-authored papers 22
Medical College of Wisconsin
Co-authored papers 22
Medical College of Wisconsin
Co-authored papers 21
Medical College of Wisconsin and Marquette University
Co-authored papers 16
Genomics Research Center
Co-authored papers 11
Medical College of Wisconsin
Co-authored papers 8
Medical College of Wisconsin
Co-authored papers 7
Heersink School of Medicine, The University of Alabama at Birmingham
Co-authored papers 7
Medical College of Wisconsin
Co-authored papers 7
Medical College of Wisconsin
Co-authored papers 6
Center for Genetic Medicine, Northwestern University.
Co-authored papers 1
Lawrence Berkeley National Laboratory
Co-authored papers 1
Oregon State University
Co-authored papers 1
carnegie mellon university
Co-authored papers 1
Co-authored papers 1
Oregon State University
Co-authored papers 1
carnegie mellon university
Co-authored papers 1
Centre Medical Universitaire
Co-authored papers 1
Harvard University
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 1
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University of Chicago
Co-authored papers 1
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Stanford University
Co-authored papers 1
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 1